RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 RNF34Q969K3 372 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PSMD1Q99460 953 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 HAUS8Q9BT25 410 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 HOMER3Q9NSC5 361 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 SLC8A1P32418 973 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 MTX1Q13505 466 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 HERC4Q5GLZ8 1057 aaPredicted RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 TRMT1LQ7Z2T5 733 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 EXOC8Q8IYI6 725 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC105Q8IYK2 499 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 RETREG2Q8NC44 543 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 AK8Q96MA6 479 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 TRPC6Q9Y210 931 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 GOLGA8CPA6NN73 597 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PFKFB1P16118 471 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 SLC1A4P43007 532 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 C10orf76Q5T2E6 689 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PPP4R1Q8TF05 950 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 SLC5A4Q9NY91 659 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 STAP2Q9UGK3 403 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 M0QZ92 97 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 XRCC5P13010 732 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 RNASELQ05823 741 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 LCMT1Q9UIC8 334 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 CD2APQ9Y5K6 639 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 ATP2B4P23634 1241 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 NAA25Q14CX7 972 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 GNPTABQ3T906 1256 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 SPATA1Q5VX52 437 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 PPP1R21Q6ZMI0 780 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 CABS1Q96KC9 395 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 NUF2Q9BZD4 464 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 PFDN6O15212 129 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 SH3BP5O60239 455 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 STAT1P42224 750 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 ZNF131P52739 623 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 SEPT2Q15019 361 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 VSIG1Q86XK7 387 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.93
SPTLC3-201ENST00000399002 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 CHMP2AO43633 222 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 STAM2O75886 525 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 GARSP41250 739 aaKnown RBP9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 PDE6CP51160 858 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 IFT122Q9HBG6 1241 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 ABCC12Q96J65 1359 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 IKBKBO14920 756 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 OR52Z1P0C646 297 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 GAP43P17677 238 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 TCIRG1Q13488 830 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 TMC4Q7Z404 712 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 FOXP1Q9H334 677 aaPredicted RBP9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 PPP2R2CQ9Y2T4 447 aa9.21□□□□□ -0.94
SPTLC3-201ENST00000399002 RGS16O15492 202 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 EVI5O60447 810 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 LMNB1P20700 586 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 HSPA1LP34931 641 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PNOCQ13519 176 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 UBE3CQ15386 1083 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 AOC3Q16853 763 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 DPP8Q6V1X1 898 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 MIER3Q7Z3K6 550 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 MIPOL1Q8TD10 442 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 OSBPL3Q9H4L5 887 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 AATFQ9NY61 560 aaKnown RBP eCLIP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 RNF14Q9UBS8 474 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 CA8P35219 290 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PRPF31Q8WWY3 499 aaKnown RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 RSAD2Q8WXG1 361 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 RTEL1Q9NZ71 1219 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 EFCAB6Q5THR3 1501 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 SMCO2A6NFE2 343 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 FOSP01100 380 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PCCAP05165 728 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 FBLN1P23142 703 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.948e-7■■□□□ 12.7
SPTLC3-201ENST00000399002 ME3Q16798 604 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 SDCCAG8Q86SQ7 713 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms