RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 PLCG2P16885 1265 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 RASA1P20936 1047 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
PRAME-202ENST00000398743 TEX11Q8IYF3 940 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 CCDC148Q8NFR7 591 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 TMEM47Q9BQJ4 181 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
PRAME-202ENST00000398743 ADAMTS3O15072 1205 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 CCP110O43303 1012 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 SYCP1Q15431 976 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 SLC27A3Q5K4L6 730 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 SLF2Q8IX21 1173 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 KIF18AQ8NI77 898 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 MED15Q96RN5 788 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 FAM205AQ6ZU69 1335 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 E2F4Q16254 413 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 MFSD14BQ5SR56 506 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 GALNT17Q6IS24 598 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 C16orf86Q6ZW13 317 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 SAMSN1Q9NSI8 373 aaKnown RBP15.73■□□□□ 0.11
PRAME-202ENST00000398743 FLT1P17948 1338 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 UBR3Q6ZT12 1888 aa15.73■□□□□ 0.11
PRAME-202ENST00000398743 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
PRAME-202ENST00000398743 CASP1P29466 404 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 HOXA10P31260 410 aaPredicted RBP15.72■□□□□ 0.11
PRAME-202ENST00000398743 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
PRAME-202ENST00000398743 SPECC1LQ69YQ0 1117 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 TBC1D16Q8TBP0 767 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 ANKRD7Q92527 254 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 FAM163AQ96GL9 167 aaPredicted RBP15.72■□□□□ 0.11
PRAME-202ENST00000398743 EYA3Q99504 573 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 M0R2N6 131 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 CYTH3O43739 400 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 TUBB4AP04350 444 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 TXLNAP40222 546 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 CDK8P49336 464 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 IL17AQ16552 155 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 SPATA1Q5VX52 437 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 TYW1BQ6NUM6 668 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 HEATR3Q7Z4Q2 680 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 DAGLBQ8NCG7 672 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 BARHL2Q9NY43 387 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 POLLQ9UGP5 575 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 MTMR7Q9Y216 660 aa15.72■□□□□ 0.11
PRAME-202ENST00000398743 SNED1Q8TER0 1413 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 TBX2Q13207 712 aaPredicted RBP15.71■□□□□ 0.11
PRAME-202ENST00000398743 CUL4BQ13620 913 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 KLHL10Q6JEL2 608 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 FAM177A1Q8N128 213 aaPredicted RBP15.71■□□□□ 0.11
PRAME-202ENST00000398743 C4orf32Q8N8J7 132 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 RASGRP4Q8TDF6 673 aa15.71■□□□□ 0.11
PRAME-202ENST00000398743 PRKCSHP14314 528 aaPredicted RBP15.7■□□□□ 0.1
PRAME-202ENST00000398743 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
PRAME-202ENST00000398743 RHBDL3P58872 404 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 NCBP1Q09161 790 aaKnown RBP15.7■□□□□ 0.1
PRAME-202ENST00000398743 SLC35G1Q2M3R5 365 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 PDXDC2PQ6P474 469 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 NEDD1Q8NHV4 660 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 PCDHA6Q9UN73 950 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 PCDHA8Q9Y5H6 950 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 GAKO14976 1311 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 A0A1B0GTH6 734 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 KLRF2D3W0D1 207 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 STXBP3O00186 592 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 DDR1Q08345 913 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 NR1I3Q14994 352 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 STAMQ92783 540 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
PRAME-202ENST00000398743 EP400Q96L91 3159 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 DDX60LQ5H9U9 1706 aaKnown RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 PPP1R3GB7ZBB8 358 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 ARHGAP6O43182 974 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 GOLGA8FQ08AF8 430 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 GOLGA8DPQ0D2H9 430 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 SMYD4Q8IYR2 804 aaPredicted RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 PARP1P09874 1014 aaKnown RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 GOLGA8HP0CJ92 632 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 STX17P56962 302 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 DTHD1Q6ZMT9 781 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 TMEM139Q8IV31 216 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 PDCL2Q8N4E4 241 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 CCDC12Q8WUD4 166 aaPredicted RBP15.69■□□□□ 0.1
PRAME-202ENST00000398743 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
PRAME-202ENST00000398743 CDKAL1Q5VV42 579 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms