RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 TEKT3Q9BXF9 490 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 OATP04181 439 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 PPP1R2P41236 205 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 DMP1Q13316 513 aaPredicted RBP12.57□□□□□ -0.4
TTC28-201ENST00000397906 PTPROQ16827 1216 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 TTC14Q96N46 770 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 HPDP32754 393 aaPredicted RBP12.57□□□□□ -0.4
TTC28-201ENST00000397906 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 PCDHA12Q9UN75 941 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 AFG3L2Q9Y4W6 797 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 ATP5JP18859 108 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 HSPA4P34932 840 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 VAV2P52735 878 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 CYP26C1Q6V0L0 522 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 ATP8A2Q9NTI2 1148 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
TTC28-201ENST00000397906 SLFN13Q68D06 897 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 C21orf2O43822 256 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 CUTAO60888 179 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 LLPHQ9BRT6 129 aaKnown RBP12.57□□□□□ -0.4
TTC28-201ENST00000397906 TNKSO95271 1327 aa12.57□□□□□ -0.4
TTC28-201ENST00000397906 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 HGSO14964 777 aaPredicted RBP12.56□□□□□ -0.4
TTC28-201ENST00000397906 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
TTC28-201ENST00000397906 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
TTC28-201ENST00000397906 KDM3AQ9Y4C1 1321 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 ABCB4P21439 1286 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 TMOD1P28289 359 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 NLRC4Q9NPP4 1024 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 ASIC3Q9UHC3 531 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
TTC28-201ENST00000397906 CLUL1Q15846 466 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 STIM2Q9P246 746 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 SLC16A2P36021 539 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 GMNNO75496 209 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 TNNC2P02585 160 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 KLHL30Q0D2K2 578 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 VPS18Q9P253 973 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 STAM2O75886 525 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 CCNA1P78396 465 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 KRT81Q14533 505 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 ZBTB7AO95365 584 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 DSCC1Q9BVC3 393 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
TTC28-201ENST00000397906 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 MAN1A1P33908 653 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 ARPP19P56211 112 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 CUL4BQ13620 913 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 PIK3CAP42336 1068 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 GIPC1O14908 333 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 PCDHA1Q9Y5I3 950 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 METP08581 1390 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 NLRP1Q9C000 1473 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
TTC28-201ENST00000397906 DAAM2Q86T65 1068 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 ZMYM4Q5VZL5 1548 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
TTC28-201ENST00000397906 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
TTC28-201ENST00000397906 KIF9Q9HAQ2 790 aa12.55□□□□□ -0.4
TTC28-201ENST00000397906 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
TTC28-201ENST00000397906 PARP2Q9UGN5 583 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 CCDC127Q96BQ5 260 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 SND1Q7KZF4 910 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC28-201ENST00000397906 CCDC110Q8TBZ0 833 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
TTC28-201ENST00000397906 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
TTC28-201ENST00000397906 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 DISC1Q9NRI5 854 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 AOX1Q06278 1338 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 TSTA3Q13630 321 aaPredicted RBP12.54□□□□□ -0.4
TTC28-201ENST00000397906 ARHGEF6Q15052 776 aa12.54□□□□□ -0.4
TTC28-201ENST00000397906 KLHL7Q8IXQ5 586 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms