RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SLC20A2Q08357 652 aa20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TBX2Q13207 712 aaPredicted RBP20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SAP30BPQ9UHR5 308 aaKnown RBP20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 COBLO75128 1261 aa20.83■□□□□ 0.92
CHRFAM7A-202ENST00000397827 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TYW1BQ6NUM6 668 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 MAPKAPK5Q8IW41 473 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 FNBP4Q8N3X1 1017 aaPredicted RBP20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 DGKHQ86XP1 1220 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 LEMD3Q9Y2U8 911 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 XDHP47989 1333 aa20.82■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TSPY3P0CV98 308 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TSPY8P0CW00 308 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CUL4BQ13620 913 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 DNAI1Q9UI46 699 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 STX8Q9UNK0 236 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 SYNRGQ9UMZ2 1314 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TEX33O43247 280 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 SLU7O95391 586 aaKnown RBP20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 RASGRP2Q7LDG7 609 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 BLIDQ8IZY5 108 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 GSDMAQ96QA5 445 aa20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 BAG1Q99933 345 aaPredicted RBP20.81■□□□□ 0.92
CHRFAM7A-202ENST00000397827 NR1I3Q14994 352 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 E2F4Q16254 413 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 SLC35G1Q2M3R5 365 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 REXO1L1PQ8IX06 675 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 MTRQ99707 1265 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 MAD2L2Q9UI95 211 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 SBF2Q86WG5 1849 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 BAG3O95817 575 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TRAPPC10P48553 1259 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ETF1P62495 437 aaKnown RBP20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 LRRN4CLQ8ND94 238 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PPP1R3GB7ZBB8 358 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 UBAP1LF5GYI3 381 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 GPSM2P81274 684 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ELF2Q15723 593 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ZNF444Q8N0Y2 327 aaPredicted RBP20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 FAM177A1Q8N128 213 aaPredicted RBP20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 IQUBQ8NA54 791 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ERO1AQ96HE7 468 aa20.8■□□□□ 0.92
CHRFAM7A-202ENST00000397827 FANCGO15287 622 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ARHGAP6O43182 974 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CYTH3O43739 400 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 GOLGA8HP0CJ92 632 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TRIM65Q6PJ69 517 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 APTXQ7Z2E3 356 aaKnown RBP20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 A0A1B0GTH6 734 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PRR5LQ6MZQ0 368 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 L2HGDHQ9H9P8 463 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PCDHA4Q9UN74 947 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PPP2R2CQ9Y2T4 447 aa20.79■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CAPN2P17655 700 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CALML3P27482 149 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PDXDC2PQ6P474 469 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TMED8Q6PL24 325 aaPredicted RBP20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 AMOTL1Q8IY63 956 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TAF1LQ8IZX4 1826 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 NHSQ6T4R5 1651 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ERICH4A6NGS2 130 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CCP110O43303 1012 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 GSTO1P78417 241 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 GRM4Q14833 912 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TERF2Q15554 542 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TOGARAM2Q6ZUX3 1019 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 HEATR3Q7Z4Q2 680 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 RPGRQ92834 1020 aaKnown RBP20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TRIM34Q9BYJ4 488 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
CHRFAM7A-202ENST00000397827 UFL1O94874 794 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 WWC2Q6AWC2 1192 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 C4orf32Q8N8J7 132 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 TMEM47Q9BQJ4 181 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 BTDP43251 543 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 PPP4CP60510 307 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 ANKS1AQ92625 1134 aa20.77■□□□□ 0.92
CHRFAM7A-202ENST00000397827 RASA1P20936 1047 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 KARSQ15046 597 aaKnown RBP20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CPLX3Q8WVH0 158 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CD209Q9NNX6 404 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 STX10O60499 249 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 RRAGBQ5VZM2 374 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ROBO3Q96MS0 1386 aa20.76■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ZSCAN12O43309 604 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 INF2Q27J81 1249 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms