RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ZNF526Q8TF50 670 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 PARP14Q460N5 1801 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 SCG2P13521 617 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 FOSBP53539 338 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 OTUD7BQ6GQQ9 843 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 FAM177A1Q8N128 213 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 ACER1Q8TDN7 264 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 SHISA4Q96DD7 197 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 KLRG1Q96E93 195 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 NDUFB10O96000 172 aa22.53■■□□□ 1.2
PDLIM2-205ENST00000397761 INPP5BP32019 993 aa22.53■■□□□ 1.2
PDLIM2-205ENST00000397761 GUCY1B3Q02153 619 aa22.53■■□□□ 1.2
PDLIM2-205ENST00000397761 KRT26Q7Z3Y9 468 aa22.53■■□□□ 1.2
PDLIM2-205ENST00000397761 SH2D4AQ9H788 454 aa22.53■■□□□ 1.2
PDLIM2-205ENST00000397761 ADM5C9JUS6 153 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 ECE1P42892 770 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 KIF23Q02241 960 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 TRIM29Q14134 588 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 USP48Q86UV5 1035 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 SH3GLB2Q9NR46 395 aa22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 FRMPD2Q68DX3 1309 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-205ENST00000397761 hCG_1642624A0A1W2PR95 340 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 DDX11L8A8MPP1 907 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 MMP1P03956 469 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 SLC1A4P43007 532 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 MTMR8Q96EF0 704 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 CHAMP1Q96JM3 812 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
PDLIM2-205ENST00000397761 USP2O75604 605 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 XBP1P17861 261 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 U2AF2P26368 475 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.5■■□□□ 1.199e-7■□□□□ 8.4
PDLIM2-205ENST00000397761 WRNIP1Q96S55 665 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 PHF20Q9BVI0 1012 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 CPVLQ9H3G5 476 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 VCPKMTQ9H867 229 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 GPCPD1Q9NPB8 672 aa22.5■■□□□ 1.19
PDLIM2-205ENST00000397761 VEGFAP15692 232 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 CCDC96Q2M329 555 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 BTNL9Q6UXG8 535 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 KCTD1Q719H9 257 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 BRAPQ7Z569 592 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 RRP36Q96EU6 259 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 WDR18Q9BV38 432 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 UBA5Q9GZZ9 404 aa22.49■■□□□ 1.19
PDLIM2-205ENST00000397761 KIF28PB7ZC32 967 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 DNM1Q05193 864 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 NPY5RQ15761 445 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 KIAA1755Q5JYT7 1200 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 MCTP1Q6DN14 999 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 TTBK2Q6IQ55 1244 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 TMEM87AQ8NBN3 555 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 CDCA5Q96FF9 252 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 GLIS2Q9BZE0 524 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 KIAA1683Q9H0B3 1180 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 JMJD4Q9H9V9 463 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 VPS54Q9P1Q0 977 aa22.48■■□□□ 1.19
PDLIM2-205ENST00000397761 GOLGA6L22H0YM25 854 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 hCG_1984214I3L0E3 225 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 BMP3P12645 472 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 C1QTNF8P60827 252 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 ATL3Q6DD88 541 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 DLK2Q6UY11 383 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 ADGRF4Q8IZF3 695 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 ZNF713Q8N859 430 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 ZKSCAN4Q969J2 545 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 FOXP1Q9H334 677 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 BARHL2Q9NY43 387 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 KCNJ14Q9UNX9 436 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 RLFQ13129 1914 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 PLA2G6O60733 806 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 PTPRAP18433 802 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 PTMSP20962 102 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 EAPPQ56P03 285 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 WWC2Q6AWC2 1192 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 FAM173BQ6P4H8 233 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 CCDC84Q86UT8 332 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 PIGSQ96S52 555 aa22.47■■□□□ 1.19
PDLIM2-205ENST00000397761 SMCHD1A6NHR9 2005 aa22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 SAFBQ15424 915 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 DIS3L2Q8IYB7 885 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 SEC63Q9UGP8 760 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 FZD1Q9UP38 647 aa22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 CNPY2Q9Y2B0 182 aa22.46■■□□□ 1.19
PDLIM2-205ENST00000397761 STXBP3O00186 592 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 KIF3CO14782 793 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 PPP1R12BO60237 982 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 KRT85P78386 507 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 MAP3K11Q16584 847 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 FOXD4L6Q3SYB3 417 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 TYW1BQ6NUM6 668 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 FOXD4L3Q6VB84 417 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 PIBF1Q8WXW3 757 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 LPAR1Q92633 364 aa22.45■■□□□ 1.18
PDLIM2-205ENST00000397761 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms