RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 UBE2HP62256 183 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 UVSSAQ2YD98 709 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 EAPPQ56P03 285 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 WASF1Q92558 559 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 CHAMP1Q96JM3 812 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 AIFM3Q96NN9 605 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 V9GY48 417 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 DEXIO95424 95 aa22.32■■□□□ 1.16
PDLIM2-204ENST00000397760 ASNSP08243 561 aa22.32■■□□□ 1.16
PDLIM2-204ENST00000397760 SNHG28P0DPA3 235 aa22.32■■□□□ 1.16
PDLIM2-204ENST00000397760 KRT26Q7Z3Y9 468 aa22.32■■□□□ 1.16
PDLIM2-204ENST00000397760 LZTS2Q9BRK4 669 aa22.32■■□□□ 1.16
PDLIM2-204ENST00000397760 ADM5C9JUS6 153 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 KLRF2D3W0D1 207 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 CTNND1O60716 968 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 GUCY1B3Q02153 619 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 CCDC183Q5T5S1 534 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 PNMA8AQ86V59 439 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 ARHGEF10LQ9HCE6 1279 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 CNTNAP5Q8WYK1 1306 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 ASPRV1Q53RT3 343 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 OTUD7BQ6GQQ9 843 aa22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-204ENST00000397760 hCG_1642624A0A1W2PR95 340 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 A0A1W2PRG0 241 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 RAD21O60216 631 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 DLK2Q6UY11 383 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 FBXO18Q8NFZ0 1043 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 NAP1L5Q96NT1 182 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 GJB4Q9NTQ9 266 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 FRMPD2Q68DX3 1309 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-204ENST00000397760 INPP5BP32019 993 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 FERMT3Q86UX7 667 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 ACER1Q8TDN7 264 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 SYNPO2Q9UMS6 1093 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 F5H6K3 240 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 ZNF500O60304 480 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 ECE1P42892 770 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 KLRC3Q07444 240 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 ZNF543Q08ER8 600 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 PKN1Q16512 942 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 RGS22Q8NE09 1264 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 GMCL1P1Q8NEA9 526 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 PIBF1Q8WXW3 757 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 WRNIP1Q96S55 665 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 CCDC39Q9UFE4 941 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 FZD1Q9UP38 647 aa22.29■■□□□ 1.16
PDLIM2-204ENST00000397760 CYTH3O43739 400 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 TRIM29Q14134 588 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 CCDC96Q2M329 555 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 SLC35G1Q2M3R5 365 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 GPATCH4Q5T3I0 446 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 DCAF4Q8WV16 495 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 SPZ1Q9BXG8 430 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 UBA5Q9GZZ9 404 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 TMX2Q9Y320 296 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 WDR90Q96KV7 1748 aa22.28■■□□□ 1.16
PDLIM2-204ENST00000397760 GADD45BO75293 160 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 SMARCA1P28370 1054 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 SLC1A4P43007 532 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 TERF1P54274 439 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 FOXD4L6Q3SYB3 417 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 FOXD4L3Q6VB84 417 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 CCDC84Q86UT8 332 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 CPVLQ9H3G5 476 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 SSC5DA1L4H1 1573 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 SCN4AP35499 1836 aa22.27■■□□□ 1.16
PDLIM2-204ENST00000397760 NDUFB10O96000 172 aa22.27■■□□□ 1.15
PDLIM2-204ENST00000397760 KRT40Q6A162 431 aa22.27■■□□□ 1.15
PDLIM2-204ENST00000397760 PRKG1Q13976 671 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 KCTD1Q719H9 257 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 SCYL3Q8IZE3 742 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 ZKSCAN4Q969J2 545 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 SH2D4AQ9H788 454 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 RRAGCQ9HB90 399 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 CLEC11AQ9Y240 323 aa22.26■■□□□ 1.15
PDLIM2-204ENST00000397760 TCHHQ07283 1943 aa22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 USP2O75604 605 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 OFD1O75665 1012 aa22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 RESTQ13127 1097 aa22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 ZSCAN16Q9H4T2 348 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 GOPCQ9HD26 462 aa22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 CNPY2Q9Y2B0 182 aa22.25■■□□□ 1.15
PDLIM2-204ENST00000397760 SCG2P13521 617 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 XBP1P17861 261 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 PFKFB3Q16875 520 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 TTBK2Q6IQ55 1244 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 CDCA5Q96FF9 252 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 GLIS2Q9BZE0 524 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 RIOX1Q9H6W3 641 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 VAT1LQ9HCJ6 419 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 ZKSCAN5Q9Y2L8 839 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms