RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LIMCH1Q9UPQ0 1083 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 NAV1Q8NEY1 1877 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 HMGCRP04035 888 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 HMGCS2P54868 508 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 EXOSC10Q01780 885 aaKnown RBP15.54■□□□□ 0.08
SEC13-209ENST00000397117 TRIM32Q13049 653 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.082e-9■□□□□ 8.8
SEC13-209ENST00000397117 COL9A3Q14050 684 aaPredicted RBP15.54■□□□□ 0.08
SEC13-209ENST00000397117 Q6ZUG5 572 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 ESR2Q92731 530 aa15.54■□□□□ 0.08
SEC13-209ENST00000397117 RPTORQ8N122 1335 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 WDR19Q8NEZ3 1342 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 USP17L5A8MUK1 530 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 DLL1O00548 723 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 KDM4AO75164 1064 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 HLA-DOAP06340 250 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 PLCD1P51178 756 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 MKNK2Q9HBH9 465 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 HMX1Q9NP08 348 aaPredicted RBP15.53■□□□□ 0.08
SEC13-209ENST00000397117 MORF4L1Q9UBU8 362 aa15.53■□□□□ 0.08
SEC13-209ENST00000397117 SIPA1L1O43166 1804 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 SMIM22K7EJ46 135 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 ORC4O43929 436 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.08
SEC13-209ENST00000397117 PRDM1O75626 825 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 FGRP09769 529 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 SART3Q15020 963 aaKnown RBP15.52■□□□□ 0.08
SEC13-209ENST00000397117 TMX3Q96JJ7 454 aa15.52■□□□□ 0.08
SEC13-209ENST00000397117 ZSCAN31Q96LW9 406 aaPredicted RBP15.52■□□□□ 0.08
SEC13-209ENST00000397117 DHX36Q9H2U1 1008 aaKnown RBP15.52■□□□□ 0.08
SEC13-209ENST00000397117 DDX60LQ5H9U9 1706 aaKnown RBP15.52■□□□□ 0.07
SEC13-209ENST00000397117 ROBO3Q96MS0 1386 aa15.52■□□□□ 0.07
SEC13-209ENST00000397117 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 NT5C2P49902 561 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 EVX2Q03828 476 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 TOB2Q14106 344 aaPredicted RBP15.51■□□□□ 0.07
SEC13-209ENST00000397117 GPR153Q6NV75 609 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 CYB5R4Q7L1T6 521 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 C7orf61Q8IZ16 206 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 BRF1Q92994 677 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 DYNLL2Q96FJ2 89 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
SEC13-209ENST00000397117 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 WDR18Q9BV38 432 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 TACC3Q9Y6A5 838 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 CDK5RAP2Q96SN8 1893 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 LAMA3Q16787 3333 aa15.51■□□□□ 0.07
SEC13-209ENST00000397117 ERICH2A1L162 156 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 ANTXR2P58335 489 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 ZNF444Q8N0Y2 327 aaPredicted RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 FBXL16Q8N461 479 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 TMEM87BQ96K49 555 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 UBAC1Q9BSL1 405 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 SH2B1Q9NRF2 756 aaPredicted RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 HERC5Q9UII4 1024 aaKnown RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 ZMYND8Q9ULU4 1186 aaPredicted RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.5■□□□□ 0.07
SEC13-209ENST00000397117 COL6A3P12111 3177 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 IFIT3O14879 490 aaKnown RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 JAG1P78504 1218 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 TMEM67Q5HYA8 995 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 MAP3K21Q5TCX8 1036 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 IQCA1Q86XH1 822 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 TRIB2Q92519 343 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 P2RX7Q99572 595 aaKnown RBP15.5■□□□□ 0.07
SEC13-209ENST00000397117 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 AS3MTQ9HBK9 375 aa15.5■□□□□ 0.07
SEC13-209ENST00000397117 MYH1P12882 1939 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 CDK8P49336 464 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 BACE1P56817 501 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 CRACR2BQ8N4Y2 399 aaPredicted RBP15.49■□□□□ 0.07
SEC13-209ENST00000397117 MTA3Q9BTC8 594 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 AGXT2Q9BYV1 514 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 C11orf49Q9H6J7 331 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 PI4KBQ9UBF8 816 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 SWAP70Q9UH65 585 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 SERPINB13Q9UIV8 391 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 TPCN1Q9ULQ1 816 aa15.49■□□□□ 0.07
SEC13-209ENST00000397117 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
SEC13-209ENST00000397117 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
SEC13-209ENST00000397117 APOBRQ0VD83 1088 aa15.48■□□□□ 0.07
SEC13-209ENST00000397117 METTL16Q86W50 562 aaKnown RBP15.48■□□□□ 0.07
SEC13-209ENST00000397117 SLC44A5Q8NCS7 719 aa15.48■□□□□ 0.07
SEC13-209ENST00000397117 EHD4Q9H223 541 aa15.48■□□□□ 0.07
SEC13-209ENST00000397117 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
SEC13-209ENST00000397117 SH2B2O14492 632 aaPredicted RBP15.47■□□□□ 0.07
SEC13-209ENST00000397117 PEX10O60683 326 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 TSPY3P0CV98 308 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 TSPY8P0CW00 308 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 CYP2B6P20813 491 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 MTMR2Q13614 643 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms