RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 DIAPH2O60879 1101 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 DESP17661 470 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 RNASE9P60153 205 aaKnown RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 KAT2BQ92831 832 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 ZNF396Q96N95 335 aaPredicted RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 MED23Q9ULK4 1368 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 FAM170AA1A519 330 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 VPS53Q5VIR6 699 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 CREB3L3Q68CJ9 461 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 ZNF790Q6PG37 636 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 BLOC1S2Q6QNY1 142 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 LONP2Q86WA8 852 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 AKT1S1Q96B36 256 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 EVI5LQ96CN4 794 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.913e-6■□□□□ 8.5
NDE1-202ENST00000396355 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.91
NDE1-202ENST00000396355 CCDC189A1A4V9 331 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 VIMP08670 466 aaKnown RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 FANCCQ00597 558 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 CUL3Q13618 768 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 MAP4K1Q92918 833 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 SELENOSQ9BQE4 189 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 FUT8Q9BYC5 575 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 BOLA2Q9H3K6 86 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 NEURL1BA8MQ27 555 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 OATP04181 439 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 TUBB4AP04350 444 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 GGCXP38435 758 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 LMBRD2Q68DH5 695 aaPredicted RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 ZMAT2Q96NC0 199 aaKnown RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 TMEM110-MUSTN1A8MSY1 372 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 ENC1O14682 589 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 GPTP24298 496 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
NDE1-202ENST00000396355 SPECC1LQ69YQ0 1117 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 CCDC63Q8NA47 563 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 NFATC2IPQ8NCF5 419 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 PIGBQ92521 554 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 SNRKQ9NRH2 765 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
NDE1-202ENST00000396355 TNS2Q63HR2 1409 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 SLC27A2O14975 620 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 C9orf131Q5VYM1 1079 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 LRRC2Q9BYS8 371 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 CEP104O60308 925 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 APLP1P51693 650 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 ANKS4BQ8N8V4 417 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 XAGE3Q8WTP9 111 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 CCDC85AQ96PX6 553 aaPredicted RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 WDR24Q96S15 920 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 FAM184BQ9ULE4 1060 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 BZW2Q9Y6E2 419 aaKnown RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 DDX58O95786 925 aaKnown RBP9.38□□□□□ -0.91
NDE1-202ENST00000396355 RPS6KA3P51812 740 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 GUCY2FP51841 1108 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 ATP11AP98196 1134 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 GCKRQ14397 625 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 TRIM58Q8NG06 486 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 CLIC6Q96NY7 704 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 SLC52A2Q9HAB3 445 aa9.38□□□□□ -0.91
NDE1-202ENST00000396355 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 GSCP56915 257 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 VSNL1P62760 191 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 IQCEQ6IPM2 695 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 COPS6Q7L5N1 327 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 IQCGQ9H095 443 aaKnown RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 FANCLQ9NW38 375 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 TMA7Q9Y2S6 64 aaKnown RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 KLHL33A6NCF5 533 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 EVI5O60447 810 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 TOMM70O94826 608 aa9.37□□□□□ -0.91
NDE1-202ENST00000396355 RFX5P48382 616 aaPredicted RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 PAPOLAP51003 745 aaKnown RBP9.37□□□□□ -0.91
NDE1-202ENST00000396355 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms