RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TDHQ8IZJ6 230 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 SLF1Q9BQI6 1058 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 FSD1Q9BTV5 496 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 NRBP1Q9UHY1 535 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 PFASO15067 1338 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 GPAA1O43292 621 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 RARBP10826 455 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 CYBAP13498 195 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 ATN1P54259 1190 aaPredicted RBP19.52■□□□□ 0.72
DDR1-229ENST00000396342 FAM83BQ5T0W9 1011 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 RIOX2Q8IUF8 465 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 NYAP2Q9P242 653 aa19.52■□□□□ 0.72
DDR1-229ENST00000396342 VWA5AO00534 786 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 MNX1P50219 401 aaPredicted RBP19.51■□□□□ 0.71
DDR1-229ENST00000396342 TMEM132BQ14DG7 1078 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 LRRC26Q2I0M4 334 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 GPR153Q6NV75 609 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 RNF180Q86T96 592 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
DDR1-229ENST00000396342 TEX13BQ9BXU2 312 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 NAPBQ9H115 298 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 CLIP2Q9UDT6 1046 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 NAV1Q8NEY1 1877 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 CDK5RAP2Q96SN8 1893 aa19.51■□□□□ 0.71
DDR1-229ENST00000396342 GSG1L2A8MUP6 293 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 PATL2C9JE40 543 aaKnown RBP19.5■□□□□ 0.71
DDR1-229ENST00000396342 TSPY3P0CV98 308 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 TSPY8P0CW00 308 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 IKQ13123 557 aaPredicted RBP19.5■□□□□ 0.71
DDR1-229ENST00000396342 GJC2Q5T442 439 aaPredicted RBP19.5■□□□□ 0.71
DDR1-229ENST00000396342 SIAH1Q8IUQ4 282 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 MAML3Q96JK9 1138 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 ATP11BQ9Y2G3 1177 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 DIS3Q9Y2L1 958 aaKnown RBP19.5■□□□□ 0.71
DDR1-229ENST00000396342 BRCA2P51587 3418 aa19.5■□□□□ 0.71
DDR1-229ENST00000396342 MYO5AQ9Y4I1 1855 aaKnown RBP19.5■□□□□ 0.71
DDR1-229ENST00000396342 F5H6K3 240 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 COBLO75128 1261 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 TTLL1O95922 423 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 KLRC3Q07444 240 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 KIAA1755Q5JYT7 1200 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 OSBP2Q969R2 916 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 FBXO40Q9UH90 709 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 SYNPO2Q9UMS6 1093 aa19.49■□□□□ 0.71
DDR1-229ENST00000396342 DOCK3Q8IZD9 2030 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 RASA1P20936 1047 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 MDM2Q00987 491 aaPredicted RBP19.48■□□□□ 0.71
DDR1-229ENST00000396342 LRIT3Q3SXY7 679 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 SNRNP48Q6IEG0 339 aaKnown RBP19.48■□□□□ 0.71
DDR1-229ENST00000396342 KIFC2Q96AC6 838 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 TINF2Q9BSI4 451 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 XPNPEP3Q9NQH7 507 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 PRDM5Q9NQX1 630 aaPredicted RBP19.48■□□□□ 0.71
DDR1-229ENST00000396342 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 FEM1BQ9UK73 627 aa19.48■□□□□ 0.71
DDR1-229ENST00000396342 FDX1P10109 184 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 RTP1P59025 263 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 ANO1Q5XXA6 986 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 IFNL3Q8IZI9 196 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 CPXCR1Q8N123 301 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 MSL3Q8N5Y2 521 aaKnown RBP19.47■□□□□ 0.71
DDR1-229ENST00000396342 SPC25Q9HBM1 224 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 ADAMTS5Q9UNA0 930 aa19.47■□□□□ 0.71
DDR1-229ENST00000396342 CHGBP05060 677 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 PGK2P07205 417 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 AKR1A1P14550 325 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 MX1P20591 662 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 PRAMEF19Q5SWL8 479 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 ANKRD35Q8N283 1001 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 DEFB123Q8N688 67 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 TRPV1Q8NER1 839 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 LRCH3Q96II8 777 aa19.46■□□□□ 0.71
DDR1-229ENST00000396342 ROBO3Q96MS0 1386 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 PRDM1O75626 825 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 NDUFB10O96000 172 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 ADCYAP1R1P41586 468 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 SLC39A5Q6ZMH5 540 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 SLC17A8Q8NDX2 589 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 CHURC1Q8WUH1 139 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 NUP88Q99567 741 aaPredicted RBP19.45■□□□□ 0.7
DDR1-229ENST00000396342 FAM184BQ9ULE4 1060 aa19.45■□□□□ 0.7
DDR1-229ENST00000396342 LRRC41Q15345 812 aa19.44■□□□□ 0.7
DDR1-229ENST00000396342 ANKRD45Q5TZF3 282 aa19.44■□□□□ 0.7
DDR1-229ENST00000396342 MTMR4Q9NYA4 1195 aa19.44■□□□□ 0.7
DDR1-229ENST00000396342 ZNF214Q9UL59 606 aaPredicted RBP19.44■□□□□ 0.7
DDR1-229ENST00000396342 DDX60LQ5H9U9 1706 aaKnown RBP19.44■□□□□ 0.7
DDR1-229ENST00000396342 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 M0R2C6 588 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 BMP3P12645 472 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 OAZ1P54368 228 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 TFAP4Q01664 338 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 ZNF792Q3KQV3 632 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 SLFN13Q68D06 897 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 FAM160B2Q86V87 743 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 CHST13Q8NET6 341 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms