RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 IGKV6D-41A0A0C4DH26 115 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 TDO2P48775 406 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 ZMYM1Q5SVZ6 1142 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 C7orf61Q8IZ16 206 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 IFNL3Q8IZI9 196 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 NUP88Q99567 741 aaPredicted RBP21.57■■□□□ 1.04
CXCL12-204ENST00000395793 FSD1Q9BTV5 496 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 PCDH10Q9P2E7 1040 aa21.57■■□□□ 1.04
CXCL12-204ENST00000395793 FOXP2O15409 715 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 PRDM1O75626 825 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 CYBAP13498 195 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 GNAT2P19087 354 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 NCAPG2Q86XI2 1143 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 REPS2Q8NFH8 660 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 MKNK2Q9HBH9 465 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 GOPCQ9HD26 462 aa21.56■■□□□ 1.04
CXCL12-204ENST00000395793 STRNO43815 780 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 RAD21O60216 631 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 DPP9Q86TI2 863 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 MROH8Q9H579 483 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 NYAP2Q9P242 653 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 PPP1R9AQ9ULJ8 1098 aa21.55■■□□□ 1.04
CXCL12-204ENST00000395793 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
CXCL12-204ENST00000395793 PATL2C9JE40 543 aaKnown RBP21.54■■□□□ 1.04
CXCL12-204ENST00000395793 VWA5AO00534 786 aa21.54■■□□□ 1.04
CXCL12-204ENST00000395793 APPP05067 770 aa21.54■■□□□ 1.04
CXCL12-204ENST00000395793 ANKRD45Q5TZF3 282 aa21.54■■□□□ 1.04
CXCL12-204ENST00000395793 OLFML2BQ68BL8 750 aa21.54■■□□□ 1.04
CXCL12-204ENST00000395793 CCDC129Q6ZRS4 1044 aa21.54■■□□□ 1.04
CXCL12-204ENST00000395793 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
CXCL12-204ENST00000395793 DDX20Q9UHI6 824 aaKnown RBP21.54■■□□□ 1.04
CXCL12-204ENST00000395793 ZNF214Q9UL59 606 aaPredicted RBP21.54■■□□□ 1.04
CXCL12-204ENST00000395793 NDUFB10O96000 172 aa21.53■■□□□ 1.04
CXCL12-204ENST00000395793 CNGA1P29973 690 aa21.53■■□□□ 1.04
CXCL12-204ENST00000395793 RIOX2Q8IUF8 465 aa21.53■■□□□ 1.04
CXCL12-204ENST00000395793 STAP2Q9UGK3 403 aa21.53■■□□□ 1.04
CXCL12-204ENST00000395793 PLIN4Q96Q06 1357 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 F5H6K3 240 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 SYN1P17600 705 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 KLRC3Q07444 240 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 HDAC1Q13547 482 aaPredicted RBP21.52■■□□□ 1.04
CXCL12-204ENST00000395793 LRRC26Q2I0M4 334 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
CXCL12-204ENST00000395793 ABRAQ8N0Z2 381 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 CEP95Q96GE4 821 aa21.52■■□□□ 1.04
CXCL12-204ENST00000395793 SLC25A27O95847 323 aa21.51■■□□□ 1.03
CXCL12-204ENST00000395793 MAML3Q96JK9 1138 aa21.51■■□□□ 1.03
CXCL12-204ENST00000395793 GDF15Q99988 308 aa21.51■■□□□ 1.03
CXCL12-204ENST00000395793 CLIP2Q9UDT6 1046 aa21.51■■□□□ 1.03
CXCL12-204ENST00000395793 SMCHD1A6NHR9 2005 aa21.51■■□□□ 1.03
CXCL12-204ENST00000395793 FCER1AP12319 257 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 STAT3P40763 770 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 PDE1AP54750 535 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 PPARAQ07869 468 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 PRAMEF19Q5SWL8 479 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 ANO1Q5XXA6 986 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 ZNF444Q8N0Y2 327 aaPredicted RBP21.5■■□□□ 1.03
CXCL12-204ENST00000395793 LRRC47Q8N1G4 583 aaKnown RBP21.5■■□□□ 1.03
CXCL12-204ENST00000395793 SLF1Q9BQI6 1058 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 NAPBQ9H115 298 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 MTMR4Q9NYA4 1195 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 TACC3Q9Y6A5 838 aa21.5■■□□□ 1.03
CXCL12-204ENST00000395793 SZT2Q5T011 3432 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 PGK2P07205 417 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 FAM47AQ5JRC9 791 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 MKL1Q969V6 931 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 MMP19Q99542 508 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 NACAP1Q9BZK3 213 aa21.49■■□□□ 1.03
CXCL12-204ENST00000395793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.49■■□□□ 1.03
CXCL12-204ENST00000395793 MSCO60682 206 aa21.48■■□□□ 1.03
CXCL12-204ENST00000395793 NEDD1Q8NHV4 660 aa21.48■■□□□ 1.03
CXCL12-204ENST00000395793 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
CXCL12-204ENST00000395793 RIPK3Q9Y572 518 aa21.48■■□□□ 1.03
CXCL12-204ENST00000395793 SOX1O00570 391 aaPredicted RBP21.47■■□□□ 1.03
CXCL12-204ENST00000395793 CTDSPL2Q05D32 466 aa21.47■■□□□ 1.03
CXCL12-204ENST00000395793 ZNF792Q3KQV3 632 aa21.47■■□□□ 1.03
CXCL12-204ENST00000395793 ZNF287Q9HBT7 754 aa21.47■■□□□ 1.03
CXCL12-204ENST00000395793 A0A1W2PPC1 479 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 DNM1LO00429 736 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 SEPT4O43236 478 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 TTLL1O95922 423 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 TSPY3P0CV98 308 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 TSPY8P0CW00 308 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 MAGEA10P43363 369 aaPredicted RBP21.46■■□□□ 1.03
CXCL12-204ENST00000395793 TFAP4Q01664 338 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 PDE4BQ07343 736 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 GJC2Q5T442 439 aaPredicted RBP21.46■■□□□ 1.03
CXCL12-204ENST00000395793 SNRNP48Q6IEG0 339 aaKnown RBP21.46■■□□□ 1.03
CXCL12-204ENST00000395793 EVI5LQ96CN4 794 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 SENP6Q9GZR1 1112 aaPredicted RBP21.46■■□□□ 1.03
CXCL12-204ENST00000395793 SLC5A4Q9NY91 659 aa21.46■■□□□ 1.03
CXCL12-204ENST00000395793 MCM3APO60318 1980 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 A0A0D9SFI3 127 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 BMP8BP34820 402 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 KCTD2Q14681 263 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 GMCL1P1Q8NEA9 526 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 FAM227BQ96M60 508 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 TEX13BQ9BXU2 312 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 LNPKQ9C0E8 428 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms