RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 GNPATO15228 680 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 SRBD1Q8N5C6 995 aaKnown RBP13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
SNCAIP-205ENST00000395469 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 RCAN1P53805 252 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 BIRC2Q13490 618 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 MORC3Q14149 939 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 TMTC3Q6ZXV5 915 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 MED15Q96RN5 788 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 ADAM21Q9UKJ8 722 aa13.05□□□□□ -0.32
SNCAIP-205ENST00000395469 MYH6P13533 1939 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 ANKRD65E5RJM6 399 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 ZPR1O75312 459 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 NLRP5P59047 1200 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 UBXN6Q9BZV1 441 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 PTGDRQ13258 359 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 KIF2AO00139 706 aaPredicted RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 MCM7P33993 719 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
SNCAIP-205ENST00000395469 KANK3Q6NY19 840 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 CDC25AP30304 524 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 NPY5RQ15761 445 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 FOXR1Q6PIV2 292 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 ENOX1Q8TC92 643 aaKnown RBP13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 DYNLL2Q96FJ2 89 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
SNCAIP-205ENST00000395469 WNK3Q9BYP7 1800 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 CALM1P0DP23 149 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 CALM2P0DP24 149 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 CALM3P0DP25 149 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 PAGE5Q96GU1 130 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 DUOX1Q9NRD9 1551 aa13.02□□□□□ -0.32
SNCAIP-205ENST00000395469 SASH3O75995 380 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 DDAH1O94760 285 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 ZNF18P17022 549 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 CORO7P57737 925 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 BAG1Q99933 345 aaPredicted RBP13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 TEX33O43247 280 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 SCG2P13521 617 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 USP5P45974 858 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 PLCD1P51178 756 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 MNAT1P51948 309 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
SNCAIP-205ENST00000395469 URI1O94763 535 aaPredicted RBP13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 CALRP27797 417 aaKnown RBP13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 TFAP4Q01664 338 aa13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 DHX8Q14562 1220 aaKnown RBP13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 UBXN4Q92575 508 aa13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 DESI2Q9BSY9 194 aa13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
SNCAIP-205ENST00000395469 EP400Q96L91 3159 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms