RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
SCAF11-203ENST00000395453 MYH8P13535 1937 aa16.25■□□□□ 0.19
SCAF11-203ENST00000395453 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-203ENST00000395453 GLRX3O76003 335 aaKnown RBP16.24■□□□□ 0.19
SCAF11-203ENST00000395453 AKR1B1P15121 316 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-203ENST00000395453 CCNA1P78396 465 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 LPAR1Q92633 364 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 OSBP2Q969R2 916 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 BTBD7Q9P203 1132 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 DDX20Q9UHI6 824 aaKnown RBP16.24■□□□□ 0.19
SCAF11-203ENST00000395453 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 RLFQ13129 1914 aa16.24■□□□□ 0.19
SCAF11-203ENST00000395453 CDH23Q9H251 3354 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 GSG1L2A8MUP6 293 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 DNM1LO00429 736 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
SCAF11-203ENST00000395453 COG2Q14746 738 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 SHHQ15465 462 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 SBK1Q52WX2 424 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 APPBP2Q92624 585 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 HOXC10Q9NYD6 342 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
SCAF11-203ENST00000395453 ZFYP08048 801 aaPredicted RBP16.22■□□□□ 0.19
SCAF11-203ENST00000395453 CNGA1P29973 690 aa16.22■□□□□ 0.19
SCAF11-203ENST00000395453 RTP1P59025 263 aa16.22■□□□□ 0.19
SCAF11-203ENST00000395453 SMAD3P84022 425 aaKnown RBP16.22■□□□□ 0.19
SCAF11-203ENST00000395453 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
SCAF11-203ENST00000395453 SLC15A5A6NIM6 579 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 PTPREP23469 700 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 ICA1Q05084 483 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 CLEC10AQ8IUN9 316 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 MYLIPQ8WY64 445 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 ARHGEF10LQ9HCE6 1279 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-203ENST00000395453 ATP11BQ9Y2G3 1177 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
SCAF11-203ENST00000395453 ERC2O15083 957 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 FOSL2P15408 326 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 ATP2B2Q01814 1243 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 OTUD7AQ8TE49 926 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-203ENST00000395453 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
SCAF11-203ENST00000395453 SH2D4AQ9H788 454 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 KANSL2Q9H9L4 492 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 FRMPD3Q5JV73 1810 aa16.2■□□□□ 0.18
SCAF11-203ENST00000395453 GPAA1O43292 621 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 IGHA2P01877 340 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 HOXC6P09630 235 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 EEF2P13639 858 aaKnown RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 C9orf50Q5SZB4 431 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 WDR78Q5VTH9 848 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 MB21D1Q8N884 522 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 TTYH1Q9H313 450 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 IVNS1ABPQ9Y6Y0 642 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 GREB1LQ9C091 1923 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 A0A0G2JMZ2 1700 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 ROBO3Q96MS0 1386 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 M0R2C6 588 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 GNAT2P19087 354 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 GRB14Q14449 540 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 SLC39A5Q6ZMH5 540 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 MOV10L1Q9BXT6 1211 aaKnown RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 SPATC1LQ9H0A9 340 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 EPB41L4AQ9HCS5 686 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-203ENST00000395453 ADAMTS5Q9UNA0 930 aa16.19■□□□□ 0.18
SCAF11-203ENST00000395453 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 TMEM265A0A087WTH1 108 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
SCAF11-203ENST00000395453 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 STRNO43815 780 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 MX1P20591 662 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 RASA1P20936 1047 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 CYP2C19P33261 490 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-203ENST00000395453 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
SCAF11-203ENST00000395453 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 BADQ92934 168 aa16.18■□□□□ 0.18
SCAF11-203ENST00000395453 PARP14Q460N5 1801 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 MINDY4BA8MYZ0 360 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 FLOT1O75955 427 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 COL9A1P20849 921 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 ZMYM1Q5SVZ6 1142 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 NPLOC4Q8TAT6 608 aa16.17■□□□□ 0.18
SCAF11-203ENST00000395453 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms