RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■□□□□ 10.7
CHCHD2-201ENST00000395422 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
CHCHD2-201ENST00000395422 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 TMEM179Q6ZVK1 233 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 C16orf59Q7L2K0 433 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 PPM1EQ8WY54 764 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 DYNLL2Q96FJ2 89 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 MMP19Q99542 508 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 TMX2Q9Y320 296 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 XIRP2A4UGR9 3374 aa16.37■□□□□ 0.21
CHCHD2-201ENST00000395422 AKR1B1P15121 316 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 IRX5P78411 483 aaPredicted RBP16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 TOX2Q96NM4 488 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 PBX4Q9BYU1 374 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 VCPKMTQ9H867 229 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 TBX21Q9UL17 535 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
CHCHD2-201ENST00000395422 MYADML2A6NDP7 307 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 SLC25A27O95847 323 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 TIMP1P01033 207 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 AKR1A1P14550 325 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 PDE6AP16499 860 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 ACLYP53396 1101 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 ICA1Q05084 483 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 RIOX2Q8IUF8 465 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 KLHDC9Q8NEP7 349 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 PRDM12Q9H4Q4 367 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 STARD7Q9NQZ5 370 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 SYNRGQ9UMZ2 1314 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
CHCHD2-201ENST00000395422 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 RASIP1Q5U651 963 aa16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 MFSD5Q6N075 450 aa16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 TMED8Q6PL24 325 aaPredicted RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 REPS2Q8NFH8 660 aa16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 ASB2Q96Q27 587 aa16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 TSEN34Q9BSV6 310 aaKnown RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 DIS3Q9Y2L1 958 aaKnown RBP16.34■□□□□ 0.21
CHCHD2-201ENST00000395422 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 KCTD2Q14681 263 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 KCNA10Q16322 511 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 SLC9C2Q5TAH2 1124 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 ADAMTS19Q8TE59 1207 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
CHCHD2-201ENST00000395422 VWA5AO00534 786 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 ADCY6O43306 1168 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 PRKAB2O43741 272 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 CSF2RAP15509 400 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 STAT3P40763 770 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 AACSQ86V21 672 aa16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
CHCHD2-201ENST00000395422 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 MOXD2PA6NHM9 499 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 ACRP10323 421 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CDK7P50613 346 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
CHCHD2-201ENST00000395422 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 ZNF365Q70YC5 407 aa16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 UHRF1Q96T88 793 aaPredicted RBP16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
CHCHD2-201ENST00000395422 CDK8P49336 464 aa16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 MRPS5P82675 430 aaKnown RBP16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 FAM83BQ5T0W9 1011 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms