RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 LDLRAD1Q5T700 205 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 NBPF11Q86T75 865 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 PHKBQ93100 1093 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 MAP3K14Q99558 947 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
LMNB1-202ENST00000395354 SLC26A6Q9BXS9 759 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 TMEM63CQ9P1W3 806 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 ZBTB21Q9ULJ3 1066 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 MYH15Q9Y2K3 1946 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 DEXIO95424 95 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 ASNSP08243 561 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 GUCY1B3Q02153 619 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 TRIM29Q14134 588 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 TMEM179Q6ZVK1 233 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 SCYL3Q8IZE3 742 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 RNF26Q9BY78 433 aaPredicted RBP22.3■■□□□ 1.16
LMNB1-202ENST00000395354 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 CSADQ9Y600 493 aa22.3■■□□□ 1.16
LMNB1-202ENST00000395354 VGLL4Q14135 290 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 SEPT2Q15019 361 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 PICK1Q9NRD5 415 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 IL17RBQ9NRM6 502 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
LMNB1-202ENST00000395354 TFIP11Q9UBB9 837 aaKnown RBP22.29■■□□□ 1.16
LMNB1-202ENST00000395354 UNCXA6NJT0 531 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 NMT2O60551 498 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 GUCY1A2P33402 732 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 KIF23Q02241 960 aaPredicted RBP22.29■■□□□ 1.16
LMNB1-202ENST00000395354 NOL9Q5SY16 702 aaKnown RBP22.29■■□□□ 1.16
LMNB1-202ENST00000395354 KRT40Q6A162 431 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 RCSD1Q6JBY9 416 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 CLMNQ96JQ2 1002 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 RBM27Q9P2N5 1060 aaKnown RBP22.29■■□□□ 1.16
LMNB1-202ENST00000395354 RCOR1Q9UKL0 485 aa22.29■■□□□ 1.16
LMNB1-202ENST00000395354 PAPPA2Q9BXP8 1791 aa22.28■■□□□ 1.16
LMNB1-202ENST00000395354 LETM1O95202 739 aaPredicted RBP22.28■■□□□ 1.16
LMNB1-202ENST00000395354 KANSL2Q9H9L4 492 aa22.28■■□□□ 1.16
LMNB1-202ENST00000395354 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.28■■□□□ 1.16
LMNB1-202ENST00000395354 SNCAIPQ9Y6H5 919 aa22.28■■□□□ 1.16
LMNB1-202ENST00000395354 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 TMEM88BA6NKF7 163 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 MRE11P49959 708 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 OTUD7BQ6GQQ9 843 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 CTCFLQ8NI51 663 aaPredicted RBP22.27■■□□□ 1.16
LMNB1-202ENST00000395354 CEP95Q96GE4 821 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 KAT14Q9H8E8 782 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 MTMR4Q9NYA4 1195 aa22.27■■□□□ 1.16
LMNB1-202ENST00000395354 PLIN4Q96Q06 1357 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 PRPF3O43395 683 aaKnown RBP22.26■■□□□ 1.15
LMNB1-202ENST00000395354 PTPRAP18433 802 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 KIF5BP33176 963 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 HUNKP57058 714 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 FUT2Q10981 343 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 CCDC183Q5T5S1 534 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 SLC10A4Q96EP9 437 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 ELP3Q9H9T3 547 aa22.26■■□□□ 1.15
LMNB1-202ENST00000395354 GOLGA6L4A6NEF3 574 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 USP17L5A8MUK1 530 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 AKAP17AQ02040 695 aaKnown RBP22.25■■□□□ 1.15
LMNB1-202ENST00000395354 TMTC3Q6ZXV5 915 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 SAPCD2Q86UD0 394 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 CCDC84Q86UT8 332 aaPredicted RBP22.25■■□□□ 1.15
LMNB1-202ENST00000395354 CLEC10AQ8IUN9 316 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 AIFM3Q96NN9 605 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 RTEL1Q9NZ71 1219 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 STX8Q9UNK0 236 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 ZHX2Q9Y6X8 837 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 ATAD5Q96QE3 1844 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 U2AF2P26368 475 aaKnown RBP eCLIP22.25■■□□□ 1.15
LMNB1-202ENST00000395354 ICA1Q05084 483 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 MYSM1Q5VVJ2 828 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 SIAH1Q8IUQ4 282 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 USP28Q96RU2 1077 aa22.25■■□□□ 1.15
LMNB1-202ENST00000395354 DOCK1Q14185 1865 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 OTOFQ9HC10 1997 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 XBP1P17861 261 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 ATP2B2Q01814 1243 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 PPP4R3BQ5MIZ7 849 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 LRSAM1Q6UWE0 723 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 GAS2L3Q86XJ1 694 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 ERO1BQ86YB8 467 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 POLR3EQ9NVU0 708 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 CLIP2Q9UDT6 1046 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 ABT1Q9ULW3 272 aaKnown RBP22.24■■□□□ 1.15
LMNB1-202ENST00000395354 TLL2Q9Y6L7 1015 aa22.24■■□□□ 1.15
LMNB1-202ENST00000395354 GREB1LQ9C091 1923 aaPredicted RBP22.24■■□□□ 1.15
LMNB1-202ENST00000395354 YEATS4O95619 227 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 TTLL1O95922 423 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
LMNB1-202ENST00000395354 NOVP48745 357 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 GNAQP50148 359 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 APLP1P51693 650 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 SAFBQ15424 915 aaKnown RBP eCLIP22.23■■□□□ 1.15
LMNB1-202ENST00000395354 PNMA1Q8ND90 353 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 GJB4Q9NTQ9 266 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 NYAP2Q9P242 653 aa22.23■■□□□ 1.15
LMNB1-202ENST00000395354 KIF28PB7ZC32 967 aa22.22■■□□□ 1.15
LMNB1-202ENST00000395354 MMP1P03956 469 aa22.22■■□□□ 1.15
LMNB1-202ENST00000395354 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
LMNB1-202ENST00000395354 GRPEL1Q9HAV7 217 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms