RNA–Protein interactions for RNA: ENST00000395322.3

CTXN3-202, Transcript of cortexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTXN3, Length 1,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN3-202ENST00000395322 PDLIM2Q96JY6 352 aa12.8□□□□□ -0.36
CTXN3-202ENST00000395322 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
CTXN3-202ENST00000395322 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
CTXN3-202ENST00000395322 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
CTXN3-202ENST00000395322 VPS54Q9P1Q0 977 aa12.8□□□□□ -0.36
CTXN3-202ENST00000395322 SERPINB13Q9UIV8 391 aa12.8□□□□□ -0.36
CTXN3-202ENST00000395322 MORC2Q9Y6X9 1032 aaPredicted RBP12.8□□□□□ -0.36
CTXN3-202ENST00000395322 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
CTXN3-202ENST00000395322 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 SCNN1DP51172 638 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
CTXN3-202ENST00000395322 PTPAQ15257 358 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
CTXN3-202ENST00000395322 SRBD1Q8N5C6 995 aaKnown RBP12.79□□□□□ -0.36
CTXN3-202ENST00000395322 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 EHD4Q9H223 541 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
CTXN3-202ENST00000395322 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
CTXN3-202ENST00000395322 PPIP5K2O43314 1243 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 GABPAQ06546 454 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 ZRSR1Q15695 479 aaKnown RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 STX1AQ16623 288 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 AOC3Q16853 763 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 GALNT17Q6IS24 598 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 CDC42EP5Q6NZY7 148 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 TIGD1Q96MW7 591 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 PSMD1Q99460 953 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 SDF4Q9BRK5 362 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 MYH4Q9Y623 1939 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 A0A1B0GVL5 298 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 NOVP48745 357 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 NLRP5P59047 1200 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
CTXN3-202ENST00000395322 MXD3Q9BW11 206 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 SPZ1Q9BXG8 430 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
CTXN3-202ENST00000395322 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 TRIM75PA6NK02 468 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 PFKFB1P16118 471 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 SYKP43405 635 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 NDUFA8P51970 172 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 NR5A1Q13285 461 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 IDI2Q9BXS1 227 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 DDX4Q9NQI0 724 aaKnown RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
CTXN3-202ENST00000395322 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.37
CTXN3-202ENST00000395322 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 hCG_1984214I3L0E3 225 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 C21orf2O43822 256 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 ZNF202O95125 648 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
CTXN3-202ENST00000395322 ANO6Q4KMQ2 910 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 ZNF713Q8N859 430 aaPredicted RBP12.76□□□□□ -0.37
CTXN3-202ENST00000395322 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
CTXN3-202ENST00000395322 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
CTXN3-202ENST00000395322 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 TTLL1O95922 423 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
CTXN3-202ENST00000395322 PTPREP23469 700 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 ZNF165P49910 485 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 DAGLBQ8NCG7 672 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 PCDHA4Q9UN74 947 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 HPSEQ9Y251 543 aa12.75□□□□□ -0.37
CTXN3-202ENST00000395322 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
CTXN3-202ENST00000395322 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms