RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 CREBRFQ8IUR6 639 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 CRNKL1Q9BZJ0 848 aaKnown RBP15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 ZSWIM4Q9H7M6 989 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 MAST2Q6P0Q8 1798 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 ARHGAP6O43182 974 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 USP17L8P0C7I0 530 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 TTC38Q5R3I4 469 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 PROM2Q8N271 834 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
GTF2F1-201ENST00000394456 PPP1R3GB7ZBB8 358 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 UFL1O94874 794 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 SLFN14P0C7P3 912 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 UTP14CQ5TAP6 766 aaKnown RBP15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 SH3RF1Q7Z6J0 888 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 DYNLL2Q96FJ2 89 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 LEMD3Q9Y2U8 911 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 FAM205AQ6ZU69 1335 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 PHLPP2Q6ZVD8 1323 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 LAMB1P07942 1786 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 TADA3O75528 432 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 TXNRD1Q16881 649 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 PLIN2Q99541 437 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 SYNRGQ9UMZ2 1314 aa15.32■□□□□ 0.04
GTF2F1-201ENST00000394456 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 PP2D1A8MPX8 630 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 CPVLQ9H3G5 476 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 CEP131Q9UPN4 1083 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 CRY2Q49AN0 593 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 FAM53CQ9NYF3 392 aa15.31■□□□□ 0.04
GTF2F1-201ENST00000394456 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 RCSD1Q6JBY9 416 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 KRT222Q8N1A0 295 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 MNS1Q8NEH6 495 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 KIFC2Q96AC6 838 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 GTPBP4Q9BZE4 634 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 MCM9Q9NXL9 1143 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 NLRP5P59047 1200 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 ELOA2Q8IYF1 753 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 SLC44A5Q8NCS7 719 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 UBXN4Q92575 508 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 KIAA1551Q9HCM1 1747 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 POLRMTO00411 1230 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 CASP14P31944 242 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 TEX35Q5T0J7 233 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 SPATA1Q5VX52 437 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 SPTY2D1Q68D10 685 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 ZNF771Q7L3S4 317 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 VPS16Q9H269 839 aa15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 ADD3Q9UEY8 706 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-201ENST00000394456 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 STX10O60499 249 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 CASQ1P31415 396 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 E2F4Q16254 413 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 XBP1P17861 261 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 ACRBPQ8NEB7 543 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 MTA3Q9BTC8 594 aa15.29■□□□□ 0.04
GTF2F1-201ENST00000394456 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 USP5P45974 858 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 RCAN1P53805 252 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 RRAGBQ5VZM2 374 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 IL17RBQ9NRM6 502 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 TAB2Q9NYJ8 693 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 GGA1Q9UJY5 639 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 GYPCP04921 128 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 FGRP09769 529 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms