RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 CTNND2Q9UQB3 1225 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 MTMR7Q9Y216 660 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 USP17L3A6NCW0 530 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 USP17L4A6NCW7 530 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 CDKAL1Q5VV42 579 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 USP17L1Q7RTZ2 530 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 MKNK2Q9HBH9 465 aa18.9■□□□□ 0.62
PRDM5-202ENST00000394435 SBF2Q86WG5 1849 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 URI1O94763 535 aaPredicted RBP18.89■□□□□ 0.61
PRDM5-202ENST00000394435 CALML3P27482 149 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 WDR66Q8TBY9 1149 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 MTRQ99707 1265 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 DDX41Q9UJV9 622 aaKnown RBP18.89■□□□□ 0.61
PRDM5-202ENST00000394435 CDC25AP30304 524 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 NFIXQ14938 502 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 DESI2Q9BSY9 194 aa18.89■□□□□ 0.61
PRDM5-202ENST00000394435 AKR1B15C9JRZ8 316 aaPredicted RBP18.88■□□□□ 0.61
PRDM5-202ENST00000394435 GRM4Q14833 912 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 RRAGBQ5VZM2 374 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 TYW1BQ6NUM6 668 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
PRDM5-202ENST00000394435 C4orf32Q8N8J7 132 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 SLC44A5Q8NCS7 719 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 CPLX3Q8WVH0 158 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 ADD3Q9UEY8 706 aaKnown RBP18.88■□□□□ 0.61
PRDM5-202ENST00000394435 PCDHA4Q9UN74 947 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 RBL2Q08999 1139 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 GRAPQ13588 217 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 MTF1Q14872 753 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 IGSF22Q8N9C0 903 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
PRDM5-202ENST00000394435 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
PRDM5-202ENST00000394435 MAD2L2Q9UI95 211 aa18.88■□□□□ 0.61
PRDM5-202ENST00000394435 GTPBP6O43824 516 aaPredicted RBP18.87■□□□□ 0.61
PRDM5-202ENST00000394435 TSPY3P0CV98 308 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 TSPY8P0CW00 308 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
PRDM5-202ENST00000394435 RFC4P35249 363 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 SLC35G1Q2M3R5 365 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 ANKS1AQ92625 1134 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 SH3GLB2Q9NR46 395 aa18.87■□□□□ 0.61
PRDM5-202ENST00000394435 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 LEMD3Q9Y2U8 911 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 PARP3Q9Y6F1 533 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 SOWAHDA6NJG2 315 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 PBX1P40424 430 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 GNG11P61952 73 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 MAPKAPK5Q8IW41 473 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 WDR24Q96S15 920 aa18.86■□□□□ 0.61
PRDM5-202ENST00000394435 BAG3O95817 575 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 GSTO1P78417 241 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 KARSQ15046 597 aaKnown RBP18.85■□□□□ 0.61
PRDM5-202ENST00000394435 FILIP1LQ4L180 1135 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
PRDM5-202ENST00000394435 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 AMOTL1Q8IY63 956 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 ZNF444Q8N0Y2 327 aaPredicted RBP18.85■□□□□ 0.61
PRDM5-202ENST00000394435 CTAGE1Q96RT6 745 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 PYM1Q9BRP8 204 aaKnown RBP18.85■□□□□ 0.61
PRDM5-202ENST00000394435 ROBO3Q96MS0 1386 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 GOLGA6L9A6NEM1 432 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 CASQ1P31415 396 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 LONP1P36776 959 aaKnown RBP18.85■□□□□ 0.61
PRDM5-202ENST00000394435 HEATR3Q7Z4Q2 680 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 PANX2Q96RD6 677 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 CARD6Q9BX69 1037 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 PCDHA6Q9UN73 950 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 PCDHA8Q9Y5H6 950 aa18.85■□□□□ 0.61
PRDM5-202ENST00000394435 CCDC194A0A1B0GVG4 234 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 CYTH3O43739 400 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 CCT6AP40227 531 aaKnown RBP18.84■□□□□ 0.61
PRDM5-202ENST00000394435 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 ZNF804AQ7Z570 1209 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 M0R2N6 131 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 ZBTB22O15209 634 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
PRDM5-202ENST00000394435 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 STAT6P42226 847 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 GNAQP50148 359 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 PPP4CP60510 307 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 ARHGAP29Q52LW3 1261 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 TMEM47Q9BQJ4 181 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 MRPL44Q9H9J2 332 aaKnown RBP18.84■□□□□ 0.61
PRDM5-202ENST00000394435 NAV1Q8NEY1 1877 aa18.84■□□□□ 0.61
PRDM5-202ENST00000394435 PP2D1A8MPX8 630 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 TXLNAP40222 546 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 INF2Q27J81 1249 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 RAD9BQ6WBX8 426 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 CNBD1Q8NA66 436 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 TMEM60Q9H2L4 133 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 TCP11L1Q9NUJ3 509 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 RWDD2AQ9UIY3 292 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 MAPK8IP1Q9UQF2 711 aa18.83■□□□□ 0.61
PRDM5-202ENST00000394435 GDAQ9Y2T3 454 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms