RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 KRT2P35908 639 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 AFMP43652 599 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
SNX11-202ENST00000393405 PDE11AQ9HCR9 933 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
SNX11-202ENST00000393405 KCNQ2O43526 872 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 NPY5RQ15761 445 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX11-202ENST00000393405 MINPP1Q9UNW1 487 aa17.26■□□□□ 0.35
SNX11-202ENST00000393405 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 USP17L21D6R901 530 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 XBP1P17861 261 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
SNX11-202ENST00000393405 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
SNX11-202ENST00000393405 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 VPS18Q9P253 973 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
SNX11-202ENST00000393405 SOWAHDA6NJG2 315 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 NMT2O60551 498 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 FECHP22830 423 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 GUCY2CP25092 1073 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 KCNQ4P56696 695 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
SNX11-202ENST00000393405 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
SNX11-202ENST00000393405 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
SNX11-202ENST00000393405 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
SNX11-202ENST00000393405 MTF1Q14872 753 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 GOLGA6L1Q8N7Z2 621 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
SNX11-202ENST00000393405 PBX1P40424 430 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 SF3B3Q15393 1217 aaKnown RBP17.24■□□□□ 0.35
SNX11-202ENST00000393405 ZNF174Q15697 407 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 WHAMMP3Q1A5X7 153 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 KLHL10Q6JEL2 608 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 FAM71BQ8TC56 605 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 PNKPQ96T60 521 aa17.24■□□□□ 0.35
SNX11-202ENST00000393405 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
SNX11-202ENST00000393405 CTAGE9A4FU28 777 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 FGRP09769 529 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 STX17P56962 302 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 MCM6Q14566 821 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 TMTC3Q6ZXV5 915 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 SMYD4Q8IYR2 804 aaPredicted RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 IRX2Q9BZI1 471 aaPredicted RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 LZTFL1Q9NQ48 299 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 MYO1AQ9UBC5 1043 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 MKRN1Q9UHC7 482 aaKnown RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 SEMA3EO15041 775 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 SH3RF1Q7Z6J0 888 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 ZSWIM4Q9H7M6 989 aa17.23■□□□□ 0.35
SNX11-202ENST00000393405 PUF60Q9UHX1 559 aaKnown RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 COL5A3P25940 1745 aaPredicted RBP17.23■□□□□ 0.35
SNX11-202ENST00000393405 TEX33O43247 280 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 STAMQ92783 540 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 ABCB6Q9NP58 842 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 EIF3CLB5ME19 914 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 N4BP1O75113 896 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 MFAP3LO75121 409 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 FAM47AQ5JRC9 791 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 SPATA1Q5VX52 437 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 EIF3CQ99613 913 aaKnown RBP17.22■□□□□ 0.35
SNX11-202ENST00000393405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX11-202ENST00000393405 ITIH6Q6UXX5 1313 aa17.22■□□□□ 0.35
SNX11-202ENST00000393405 MAGEA9P43362 315 aa17.21■□□□□ 0.35
SNX11-202ENST00000393405 MECOMQ03112 1051 aa17.21■□□□□ 0.35
SNX11-202ENST00000393405 RBL2Q08999 1139 aa17.21■□□□□ 0.35
SNX11-202ENST00000393405 CUL4BQ13620 913 aa17.21■□□□□ 0.35
SNX11-202ENST00000393405 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
SNX11-202ENST00000393405 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms