RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 TGFB2P61812 414 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 WWC2Q6AWC2 1192 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 TYW1BQ6NUM6 668 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 HEATR3Q7Z4Q2 680 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 CCDC17Q96LX7 622 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 CBX8Q9HC52 389 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 PSMD14O00487 310 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 ADAMTS3O15072 1205 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 SMARCA1P28370 1054 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 SOGA3Q5TF21 947 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 PIK3AP1Q6ZUJ8 805 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 BLIDQ8IZY5 108 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 TIGD1Q96MW7 591 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 BARHL2Q9NY43 387 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 PCDHA4Q9UN74 947 aa23.22■■□□□ 1.31
ME3-202ENST00000393324 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
ME3-202ENST00000393324 COL4A5P29400 1685 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 ESPNB1AK53 854 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 RRP9O43818 475 aaKnown RBP23.21■■□□□ 1.31
ME3-202ENST00000393324 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
ME3-202ENST00000393324 GRIN1Q05586 938 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 STX1AQ16623 288 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 LUZP1Q86V48 1076 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 GREB1LQ9C091 1923 aaPredicted RBP23.21■■□□□ 1.31
ME3-202ENST00000393324 FAM196BA6NMK8 535 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 CAVIN2O95810 425 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 POLD1P28340 1107 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 ZNF165P49910 485 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 SPECC1Q5M775 1068 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 CCDC148Q8NFR7 591 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 KIAA1468Q9P260 1216 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 KCNH3Q9ULD8 1083 aa23.21■■□□□ 1.31
ME3-202ENST00000393324 STXBP3O00186 592 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 WNT7AO00755 349 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 TTC38Q5R3I4 469 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
ME3-202ENST00000393324 TRIM34Q9BYJ4 488 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 MORC2Q9Y6X9 1032 aaPredicted RBP23.2■■□□□ 1.3
ME3-202ENST00000393324 MYH4Q9Y623 1939 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 BMP15O95972 392 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 ZNF579Q8NAF0 562 aaKnown RBP23.2■■□□□ 1.3
ME3-202ENST00000393324 UBA5Q9GZZ9 404 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 MTFR1LQ9H019 292 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 VAT1LQ9HCJ6 419 aa23.2■■□□□ 1.3
ME3-202ENST00000393324 FRMPD2Q68DX3 1309 aaPredicted RBP23.19■■□□□ 1.3
ME3-202ENST00000393324 ENTPD3O75355 529 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 SNHG28P0DPA3 235 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 TRAPPC10P48553 1259 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 ZNF174Q15697 407 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 ASPRV1Q53RT3 343 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 FOXP4Q8IVH2 680 aaPredicted RBP23.19■■□□□ 1.3
ME3-202ENST00000393324 GMLQ99445 158 aa23.19■■□□□ 1.3
ME3-202ENST00000393324 ADCY5O95622 1261 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 PLCB2Q00722 1185 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 ATP2B2Q01814 1243 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 CERKLQ49MI3 558 aaPredicted RBP23.18■■□□□ 1.3
ME3-202ENST00000393324 GALNT17Q6IS24 598 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 ANO10Q9NW15 660 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 FAM13BQ9NYF5 915 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 SEC63Q9UGP8 760 aaKnown RBP23.18■■□□□ 1.3
ME3-202ENST00000393324 A0A087WWV3 80 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 GLIPR1L2Q4G1C9 344 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 NIM1KQ8IY84 436 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 FAM177A1Q8N128 213 aaPredicted RBP23.18■■□□□ 1.3
ME3-202ENST00000393324 HDAC9Q9UKV0 1011 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 ZNRF3Q9ULT6 936 aa23.18■■□□□ 1.3
ME3-202ENST00000393324 ZBTB12Q9Y330 459 aaPredicted RBP23.18■■□□□ 1.3
ME3-202ENST00000393324 DALRD3Q5D0E6 543 aaKnown RBP23.17■■□□□ 1.3
ME3-202ENST00000393324 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 C11orf57Q6ZUT1 292 aaPredicted RBP23.17■■□□□ 1.3
ME3-202ENST00000393324 OGFOD1Q8N543 542 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 DAGLBQ8NCG7 672 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 PIGSQ96S52 555 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 RIOX1Q9H6W3 641 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 SPDYE2BA6NHP3 402 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 M0R2N6 131 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 SPDYE6P0CI01 402 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 TATDN1Q6P1N9 297 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 RASGRP4Q8TDF6 673 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 ATRNL1Q5VV63 1379 aa23.17■■□□□ 1.3
ME3-202ENST00000393324 NAPAP54920 295 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 LONRF3Q496Y0 759 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 CCDC12Q8WUD4 166 aaPredicted RBP23.16■■□□□ 1.3
ME3-202ENST00000393324 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
ME3-202ENST00000393324 AP5Z1O43299 807 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 PTGDRQ13258 359 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 DLGAP5Q15398 846 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 ZRSR1Q15695 479 aaKnown RBP23.16■■□□□ 1.3
ME3-202ENST00000393324 GPCPD1Q9NPB8 672 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 TMOD2Q9NZR1 351 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 PCDHA6Q9UN73 950 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 PCDHA8Q9Y5H6 950 aa23.16■■□□□ 1.3
ME3-202ENST00000393324 ZNF543Q08ER8 600 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 SHROOM1Q2M3G4 852 aaPredicted RBP23.15■■□□□ 1.3
ME3-202ENST00000393324 HS1BP3Q53T59 392 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 METTL16Q86W50 562 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms