RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 PDILTQ8N807 584 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 ENOX1Q8TC92 643 aaKnown RBP16.29■□□□□ 0.2
MKS1-203ENST00000393120 PLIN4Q96Q06 1357 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 A0A087X0B3 334 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 DYNC1I1O14576 645 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 UQCRHP07919 91 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 SKILP12757 684 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
MKS1-203ENST00000393120 CCZ1BP86790 482 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 CCZ1P86791 482 aaPredicted RBP16.29■□□□□ 0.2
MKS1-203ENST00000393120 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 PAGE5Q96GU1 130 aa16.29■□□□□ 0.2
MKS1-203ENST00000393120 ANKRD31Q8N7Z5 1873 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 STXBP3O00186 592 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 GABPAQ06546 454 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 DHX58Q96C10 678 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 CDK5RAP2Q96SN8 1893 aa16.28■□□□□ 0.2
MKS1-203ENST00000393120 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
MKS1-203ENST00000393120 ATP1A3P13637 1013 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 GTF2F1P35269 517 aaKnown RBP eCLIP16.27■□□□□ 0.2
MKS1-203ENST00000393120 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
MKS1-203ENST00000393120 ARID5BQ14865 1188 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 E2F4Q16254 413 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.2
MKS1-203ENST00000393120 MASTLQ96GX5 879 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 PCDHA6Q9UN73 950 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 PCDHA8Q9Y5H6 950 aa16.27■□□□□ 0.2
MKS1-203ENST00000393120 RIMBP2O15034 1052 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 ADAMTS3O15072 1205 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 ZNF18P17022 549 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 KCNJ6P48051 423 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 UBASH3AP57075 661 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 DPYDQ12882 1025 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 ZNF772Q68DY9 489 aaPredicted RBP16.27■□□□□ 0.19
MKS1-203ENST00000393120 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.19
MKS1-203ENST00000393120 CERS5Q8N5B7 392 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 IQUBQ8NA54 791 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.19
MKS1-203ENST00000393120 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.19
MKS1-203ENST00000393120 LAD1O00515 517 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 APBA3O96018 575 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 MCM7P33993 719 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 IL17AQ16552 155 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 MRIQ9BWK5 157 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
MKS1-203ENST00000393120 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
MKS1-203ENST00000393120 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 SERPINC1P01008 464 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 MMP10P09238 476 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 ARMCX5Q6P1M9 558 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
MKS1-203ENST00000393120 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
MKS1-203ENST00000393120 TTF2Q9UNY4 1162 aaKnown RBP16.25■□□□□ 0.19
MKS1-203ENST00000393120 C10orf71Q711Q0 1435 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 FOCADQ5VW36 1801 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 hCG_1984214I3L0E3 225 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 FMR1Q06787 632 aaKnown RBP eCLIP16.24■□□□□ 0.19
MKS1-203ENST00000393120 PDXDC2PQ6P474 469 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 PODNQ7Z5L7 613 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 VSTM4Q8IW00 320 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 ZNF713Q8N859 430 aaPredicted RBP16.24■□□□□ 0.19
MKS1-203ENST00000393120 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
MKS1-203ENST00000393120 ESYT2A0FGR8 921 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
MKS1-203ENST00000393120 GNA11P29992 359 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 PRPHP41219 470 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 FKBP1AP62942 108 aaKnown RBP16.23■□□□□ 0.19
MKS1-203ENST00000393120 KRT25Q7Z3Z0 450 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 DPF2Q92785 391 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 MED15Q96RN5 788 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 USP40Q9NVE5 1235 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 NRDCO43847 1150 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 SNHG28P0DPA3 235 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 AFMP43652 599 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
MKS1-203ENST00000393120 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 USP17L2Q6R6M4 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms