RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 KRT9P35527 623 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 FAM193AP78312 1265 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 PDE4DQ08499 809 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 SPA17Q15506 151 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 TRMT1LQ7Z2T5 733 aaKnown RBP11.85□□□□□ -0.51
CALD1-203ENST00000393118 VGLL2Q8N8G2 317 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 BIN2Q9UBW5 565 aaPredicted RBP11.85□□□□□ -0.51
CALD1-203ENST00000393118 PPP2R2CQ9Y2T4 447 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
CALD1-203ENST00000393118 HLA-DOAP06340 250 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 PLCG2P16885 1265 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 RAD51AP2Q09MP3 1159 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 TDRD12Q587J7 1177 aaKnown RBP11.84□□□□□ -0.51
CALD1-203ENST00000393118 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
CALD1-203ENST00000393118 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 SLFN14P0C7P3 912 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 CNGA4Q8IV77 575 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 BRIP1Q9BX63 1249 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 ACBD3Q9H3P7 528 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 PHACTR2O75167 634 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
CALD1-203ENST00000393118 LRRC47Q8N1G4 583 aaKnown RBP11.84□□□□□ -0.51
CALD1-203ENST00000393118 FOXP2O15409 715 aa11.83□□□□□ -0.51
CALD1-203ENST00000393118 USP8P40818 1118 aa11.83□□□□□ -0.51
CALD1-203ENST00000393118 DYMQ7RTS9 669 aa11.83□□□□□ -0.51
CALD1-203ENST00000393118 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.51
CALD1-203ENST00000393118 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.51
CALD1-203ENST00000393118 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.51
CALD1-203ENST00000393118 LUC7L2Q9Y383 392 aaKnown RBP11.83□□□□□ -0.51
CALD1-203ENST00000393118 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 ERLIN1O75477 346 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 TCP10Q12799 353 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 VSTM4Q8IW00 320 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 BCL9O00512 1426 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 SCNN1DP51172 638 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
CALD1-203ENST00000393118 NTRK3Q16288 839 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 CSGALNACT2Q8N6G5 542 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 NARFQ9UHQ1 456 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 FBXO2Q9UK22 296 aaPredicted RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 SEMA3EO15041 775 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 RHOXF2BP0C7M4 288 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 TECP42680 631 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 CCZ1BP86790 482 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
CALD1-203ENST00000393118 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 CCDC181Q5TID7 509 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 RHOXF2Q9BQY4 288 aa11.83□□□□□ -0.52
CALD1-203ENST00000393118 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 PTPAQ15257 358 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 CTAGE9A4FU28 777 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 CABP7Q86V35 215 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 TSG101Q99816 390 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 VPS18Q9P253 973 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 CASP14P31944 242 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 MATR3P43243 847 aaKnown RBP eCLIP11.82□□□□□ -0.52
CALD1-203ENST00000393118 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
CALD1-203ENST00000393118 MORC3Q14149 939 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 KRT79Q5XKE5 535 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 CAPZA3Q96KX2 299 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 OSBPL5Q9H0X9 879 aaPredicted RBP11.82□□□□□ -0.52
CALD1-203ENST00000393118 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
CALD1-203ENST00000393118 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 CCDC91Q7Z6B0 441 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 REXO1Q8N1G1 1221 aaKnown RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 TUBB4AP04350 444 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms