RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 EIF4ENIF1Q9NRA8 985 aaKnown RBP17■□□□□ 0.31
SHTN1-204ENST00000392903 N4BP1O75113 896 aaKnown RBP17■□□□□ 0.31
SHTN1-204ENST00000392903 CCDC175P0C221 793 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
SHTN1-204ENST00000392903 LONRF3Q496Y0 759 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 IQCA1Q86XH1 822 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
SHTN1-204ENST00000392903 CABP5Q9NP86 173 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 VPS54Q9P1Q0 977 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 PCDHB6Q9Y5E3 794 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
SHTN1-204ENST00000392903 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 SEMA3EO15041 775 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
SHTN1-204ENST00000392903 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
SHTN1-204ENST00000392903 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 RESP18Q5W5W9 173 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
SHTN1-204ENST00000392903 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 ZSWIM4Q9H7M6 989 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
SHTN1-204ENST00000392903 NID2Q14112 1375 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 DESI2Q9BSY9 194 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
SHTN1-204ENST00000392903 NFIXQ14938 502 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 GBP3Q9H0R5 595 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 MYH6P13533 1939 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 CPP00450 1065 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 TUBBP07437 444 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 ZNF18P17022 549 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 PANX2Q96RD6 677 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 IRX2Q9BZI1 471 aaPredicted RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 MED4Q9NPJ6 270 aa16.98■□□□□ 0.31
SHTN1-204ENST00000392903 PUF60Q9UHX1 559 aaKnown RBP16.98■□□□□ 0.31
SHTN1-204ENST00000392903 FOXN1O15353 648 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 CASP8Q14790 479 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 PKN1Q16512 942 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 HSP90B2PQ58FF3 399 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
SHTN1-204ENST00000392903 RGL2O15211 777 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 PDE4BQ07343 736 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 TROAPQ12815 778 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 RILPL1Q5EBL4 403 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
SHTN1-204ENST00000392903 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 NCAPGQ9BPX3 1015 aa16.97■□□□□ 0.31
SHTN1-204ENST00000392903 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
SHTN1-204ENST00000392903 KIF5CO60282 957 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 BMP6P22004 513 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 FOXP4Q8IVH2 680 aaPredicted RBP16.96■□□□□ 0.31
SHTN1-204ENST00000392903 ELOA2Q8IYF1 753 aaPredicted RBP16.96■□□□□ 0.31
SHTN1-204ENST00000392903 SUGCTQ9HAC7 445 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 ADGRG1Q9Y653 693 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 DUOX1Q9NRD9 1551 aa16.96■□□□□ 0.31
SHTN1-204ENST00000392903 RCAN1P53805 252 aa16.96■□□□□ 0.3
SHTN1-204ENST00000392903 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.3
SHTN1-204ENST00000392903 SUGP1Q8IWZ8 645 aaKnown RBP16.96■□□□□ 0.3
SHTN1-204ENST00000392903 EFCAB13Q8IY85 973 aa16.96■□□□□ 0.3
SHTN1-204ENST00000392903 ACBD3Q9H3P7 528 aa16.96■□□□□ 0.3
SHTN1-204ENST00000392903 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.3
SHTN1-204ENST00000392903 PCDHA5Q9Y5H7 936 aa16.96■□□□□ 0.3
SHTN1-204ENST00000392903 GOLGB1Q14789 3259 aaKnown RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 FGRP09769 529 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 FUT2Q10981 343 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 MTF1Q14872 753 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 CNBD1Q8NA66 436 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 FBXO2Q9UK22 296 aaPredicted RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 POLR2DO15514 142 aaKnown RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 CHRM1P11229 460 aaPredicted RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 VSNL1P62760 191 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 DIXDC1Q155Q3 683 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 GRIK5Q16478 980 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 USP49Q70CQ1 688 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 MYCBPQ99417 103 aaPredicted RBP16.95■□□□□ 0.3
SHTN1-204ENST00000392903 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 NFE2L3Q9Y4A8 694 aa16.95■□□□□ 0.3
SHTN1-204ENST00000392903 TSPY2A6NKD2 308 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 AKR1B15C9JRZ8 316 aaPredicted RBP16.94■□□□□ 0.3
SHTN1-204ENST00000392903 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
SHTN1-204ENST00000392903 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 ENOX1Q8TC92 643 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms