RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 NCAPG2Q86XI2 1143 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 NUP88Q99567 741 aaPredicted RBP19.86■□□□□ 0.77
PTPRK-208ENST00000392449 PRDM1O75626 825 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 CNGA1P29973 690 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 FAM83BQ5T0W9 1011 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 DPP9Q86TI2 863 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 ROBO3Q96MS0 1386 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 IGHA2P01877 340 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 APPP05067 770 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 TDO2P48775 406 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 MB21D1Q8N884 522 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 TTC41PQ6P2S7 1318 aa19.85■□□□□ 0.77
PTPRK-208ENST00000392449 ZFYP08048 801 aaPredicted RBP19.84■□□□□ 0.77
PTPRK-208ENST00000392449 COL6A1P12109 1028 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 GIMAP6Q6P9H5 292 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 SHCBP1Q8NEM2 672 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
PTPRK-208ENST00000392449 FSD1Q9BTV5 496 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 GOPCQ9HD26 462 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 ZNFX1Q9P2E3 1918 aaKnown RBP19.84■□□□□ 0.77
PTPRK-208ENST00000392449 DDX20Q9UHI6 824 aaKnown RBP19.84■□□□□ 0.77
PTPRK-208ENST00000392449 MYH4Q9Y623 1939 aa19.84■□□□□ 0.77
PTPRK-208ENST00000392449 CYBAP13498 195 aa19.83■□□□□ 0.76
PTPRK-208ENST00000392449 MX1P20591 662 aa19.83■□□□□ 0.76
PTPRK-208ENST00000392449 LRRC26Q2I0M4 334 aa19.83■□□□□ 0.76
PTPRK-208ENST00000392449 ANO1Q5XXA6 986 aa19.83■□□□□ 0.76
PTPRK-208ENST00000392449 SALL3Q9BXA9 1300 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 PRAMEF19Q5SWL8 479 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 CCDC129Q6ZRS4 1044 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 IFNL3Q8IZI9 196 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 MROH8Q9H579 483 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 PPP1R9AQ9ULJ8 1098 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 ADAMTS5Q9UNA0 930 aa19.82■□□□□ 0.76
PTPRK-208ENST00000392449 VWA5AO00534 786 aa19.81■□□□□ 0.76
PTPRK-208ENST00000392449 ERC2O15083 957 aa19.81■□□□□ 0.76
PTPRK-208ENST00000392449 STRNO43815 780 aa19.81■□□□□ 0.76
PTPRK-208ENST00000392449 PGK2P07205 417 aa19.81■□□□□ 0.76
PTPRK-208ENST00000392449 IGKV6D-41A0A0C4DH26 115 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 PATL2C9JE40 543 aaKnown RBP19.8■□□□□ 0.76
PTPRK-208ENST00000392449 SOX1O00570 391 aaPredicted RBP19.8■□□□□ 0.76
PTPRK-208ENST00000392449 NDUFB10O96000 172 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 GNAT2P19087 354 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 OLFML2BQ68BL8 750 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 REPS2Q8NFH8 660 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 CLIP2Q9UDT6 1046 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 ZNF214Q9UL59 606 aaPredicted RBP19.8■□□□□ 0.76
PTPRK-208ENST00000392449 PLXNA1Q9UIW2 1896 aa19.8■□□□□ 0.76
PTPRK-208ENST00000392449 F5H6K3 240 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 FOXP2O15409 715 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 FCER1AP12319 257 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 KLRC3Q07444 240 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 ZMYM1Q5SVZ6 1142 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
PTPRK-208ENST00000392449 CEP95Q96GE4 821 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 MAML3Q96JK9 1138 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 GDF15Q99988 308 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 SENP6Q9GZR1 1112 aaPredicted RBP19.79■□□□□ 0.76
PTPRK-208ENST00000392449 NYAP2Q9P242 653 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 MAGEA10P43363 369 aaPredicted RBP19.79■□□□□ 0.76
PTPRK-208ENST00000392449 FAM47AQ5JRC9 791 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 GJC2Q5T442 439 aaPredicted RBP19.79■□□□□ 0.76
PTPRK-208ENST00000392449 RIOX2Q8IUF8 465 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 CHMP4CQ96CF2 233 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 MMP19Q99542 508 aa19.79■□□□□ 0.76
PTPRK-208ENST00000392449 STAT3P40763 770 aa19.78■□□□□ 0.76
PTPRK-208ENST00000392449 ATN1P54259 1190 aaPredicted RBP19.78■□□□□ 0.76
PTPRK-208ENST00000392449 ZNF444Q8N0Y2 327 aaPredicted RBP19.78■□□□□ 0.76
PTPRK-208ENST00000392449 ABRAQ8N0Z2 381 aa19.78■□□□□ 0.76
PTPRK-208ENST00000392449 LRCH3Q96II8 777 aa19.78■□□□□ 0.76
PTPRK-208ENST00000392449 SLF1Q9BQI6 1058 aa19.78■□□□□ 0.76
PTPRK-208ENST00000392449 INCENPQ9NQS7 918 aa19.78■□□□□ 0.76
PTPRK-208ENST00000392449 SLC25A27O95847 323 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
PTPRK-208ENST00000392449 SLC4A3P48751 1232 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 LRRFIP1Q32MZ4 808 aaKnown RBP19.77■□□□□ 0.76
PTPRK-208ENST00000392449 NAPBQ9H115 298 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 RNF39Q9H2S5 420 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 MTMR4Q9NYA4 1195 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 RIPK3Q9Y572 518 aa19.77■□□□□ 0.76
PTPRK-208ENST00000392449 MSCO60682 206 aa19.76■□□□□ 0.75
PTPRK-208ENST00000392449 PPARAQ07869 468 aa19.76■□□□□ 0.75
PTPRK-208ENST00000392449 VPS53Q5VIR6 699 aa19.76■□□□□ 0.75
PTPRK-208ENST00000392449 NACAP1Q9BZK3 213 aa19.76■□□□□ 0.75
PTPRK-208ENST00000392449 SMCHD1A6NHR9 2005 aa19.76■□□□□ 0.75
PTPRK-208ENST00000392449 DNM1LO00429 736 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 SEPT4O43236 478 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 TAL1P17542 331 aaPredicted RBP19.75■□□□□ 0.75
PTPRK-208ENST00000392449 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 KCTD2Q14681 263 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
PTPRK-208ENST00000392449 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 SLC5A4Q9NY91 659 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 TACC3Q9Y6A5 838 aa19.75■□□□□ 0.75
PTPRK-208ENST00000392449 TSPY3P0CV98 308 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 TSPY8P0CW00 308 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 PDE1AP54750 535 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 TFAP4Q01664 338 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 ZNF792Q3KQV3 632 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms