RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 GTF2F1P35269 517 aaKnown RBP eCLIP24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 PTPN21Q16825 1174 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 HEATR3Q7Z4Q2 680 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 IFNKQ9P0W0 207 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 PLCG2P16885 1265 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 AFMP43652 599 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 POSTNQ15063 836 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 HOMER1Q86YM7 354 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 ANKS1AQ92625 1134 aa24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 SYMPKQ92797 1274 aaKnown RBP24.26■■□□□ 1.47
SPTBN4-203ENST00000392023 SLF2Q8IX21 1173 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 STAMQ92783 540 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 MRFAP1L1Q96HT8 127 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 PRIMPOLQ96LW4 560 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 XPO4Q9C0E2 1151 aaKnown RBP24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 KLRF2D3W0D1 207 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 ALDH1B1P30837 517 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 WWC2Q6AWC2 1192 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 TCP11L1Q9NUJ3 509 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 MYH1P12882 1939 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 SNED1Q8TER0 1413 aa24.25■■□□□ 1.47
SPTBN4-203ENST00000392023 TPM3P06753 285 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 CDC25AP30304 524 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 PDE6BP35913 854 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 HSD3B7Q9H2F3 369 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 ACTN4O43707 911 aaKnown RBP24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 BLIDQ8IZY5 108 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 ZNF579Q8NAF0 562 aaKnown RBP24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 BPIFA3Q9BQP9 254 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 USP40Q9NVE5 1235 aa24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
SPTBN4-203ENST00000392023 CHRNA5P30532 468 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 CACNB3P54284 484 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 UBA5Q9GZZ9 404 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 ZNF287Q9HBT7 754 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 MAN1B1Q9UKM7 699 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 IL17AQ16552 155 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 TMC4Q7Z404 712 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 NEDD1Q8NHV4 660 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 LTBP1Q14766 1721 aa24.23■■□□□ 1.47
SPTBN4-203ENST00000392023 PALM3A6NDB9 673 aaPredicted RBP24.22■■□□□ 1.47
SPTBN4-203ENST00000392023 CDC25BP30305 580 aa24.22■■□□□ 1.47
SPTBN4-203ENST00000392023 C2CD5Q86YS7 1000 aa24.22■■□□□ 1.47
SPTBN4-203ENST00000392023 FRMPD2Q68DX3 1309 aaPredicted RBP24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 USP17L5A8MUK1 530 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 KIAA0825Q8IV33 1275 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 TMX4Q9H1E5 349 aaPredicted RBP24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 NFIAQ12857 509 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 LRRC8AQ8IWT6 810 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 LRRC47Q8N1G4 583 aaKnown RBP24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 FANCLQ9NW38 375 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 PCDHA4Q9UN74 947 aa24.21■■□□□ 1.47
SPTBN4-203ENST00000392023 SMTNL1A8MU46 457 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 IGSF3O75054 1194 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 AKR1B1P15121 316 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 ZFPM1Q8IX07 1006 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 TRMT44Q8IYL2 757 aaKnown RBP24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 DPF2Q92785 391 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 SMARCE1Q969G3 411 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 SPTLC3Q9NUV7 552 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 LRRC37AA6NMS7 1700 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 PARP1P09874 1014 aaKnown RBP24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 ATP2C1P98194 919 aaPredicted RBP24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 CCDC178Q5BJE1 867 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 CERS3Q8IU89 383 aa24.2■■□□□ 1.46
SPTBN4-203ENST00000392023 ADAMTSL1Q8N6G6 1762 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 RXRBP28702 533 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 GNAQP50148 359 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 TCP10Q12799 353 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 INF2Q27J81 1249 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 CDC42EP5Q6NZY7 148 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 PCDHA6Q9UN73 950 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 PCDHA8Q9Y5H6 950 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 STXBP3O00186 592 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 FANCCQ00597 558 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 TMC6Q7Z403 805 aa24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 HOOK1Q9UJC3 728 aaKnown RBP24.19■■□□□ 1.46
SPTBN4-203ENST00000392023 FAM196BA6NMK8 535 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 MYL5Q02045 173 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 FMR1Q06787 632 aaKnown RBP eCLIP24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 CALML3P27482 149 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 APOBEC3HQ6NTF7 200 aaKnown RBP24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 FERMT2Q96AC1 680 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 PIGSQ96S52 555 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 BARHL2Q9NY43 387 aa24.18■■□□□ 1.46
SPTBN4-203ENST00000392023 CCDC194A0A1B0GVG4 234 aa24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 SARSP49591 514 aaKnown RBP24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 RBM5P52756 815 aaKnown RBP eCLIP24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 TPM4P67936 248 aa24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 ATP2B2Q01814 1243 aa24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 PAGE5Q96GU1 130 aa24.17■■□□□ 1.46
SPTBN4-203ENST00000392023 IKBKBO14920 756 aa24.16■■□□□ 1.46
SPTBN4-203ENST00000392023 SERPINC1P01008 464 aa24.16■■□□□ 1.46
SPTBN4-203ENST00000392023 TOP1P11387 765 aaKnown RBP24.16■■□□□ 1.46
SPTBN4-203ENST00000392023 SMYD4Q8IYR2 804 aaPredicted RBP24.16■■□□□ 1.46
SPTBN4-203ENST00000392023 PDGFDQ9GZP0 370 aaPredicted RBP24.16■■□□□ 1.46
SPTBN4-203ENST00000392023 BLZF1Q9H2G9 400 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms