RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
SNRPN-202ENST00000390687 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
SNRPN-202ENST00000390687 SPATC1LQ9H0A9 340 aa17.69■□□□□ 0.42
SNRPN-202ENST00000390687 PLIN4Q96Q06 1357 aa17.68■□□□□ 0.42
SNRPN-202ENST00000390687 HMGCRP04035 888 aa17.68■□□□□ 0.42
SNRPN-202ENST00000390687 CWC22Q9HCG8 908 aaKnown RBP17.68■□□□□ 0.42
SNRPN-202ENST00000390687 SGPL1O95470 568 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 GSPT1P15170 499 aaKnown RBP17.67■□□□□ 0.42
SNRPN-202ENST00000390687 RGS2P41220 211 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 MAP2K5Q13163 448 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 TMEM132BQ14DG7 1078 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 LRRC47Q8N1G4 583 aaKnown RBP17.67■□□□□ 0.42
SNRPN-202ENST00000390687 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 U2AF1L4Q8WU68 220 aaKnown RBP17.67■□□□□ 0.42
SNRPN-202ENST00000390687 PAK6Q9NQU5 681 aaPredicted RBP17.67■□□□□ 0.42
SNRPN-202ENST00000390687 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 SLC15A5A6NIM6 579 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 TSPY2A6NKD2 308 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 HIP1O00291 1037 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 VWA5AO00534 786 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 ERCC3P19447 782 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 MFAP1P55081 439 aaKnown RBP17.67■□□□□ 0.42
SNRPN-202ENST00000390687 GRB14Q14449 540 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 PLS1Q14651 629 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 CCL14Q16627 93 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 TTC22Q5TAA0 569 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 SYNPO2Q9UMS6 1093 aa17.67■□□□□ 0.42
SNRPN-202ENST00000390687 ORC4O43929 436 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
SNRPN-202ENST00000390687 NMT2O60551 498 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 HAND2P61296 217 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 GMCL1P1Q8NEA9 526 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 SHCBP1Q8NEM2 672 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 DEFB118Q96PH6 123 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 IVNS1ABPQ9Y6Y0 642 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 PARP14Q460N5 1801 aa17.66■□□□□ 0.42
SNRPN-202ENST00000390687 MYH4Q9Y623 1939 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 RPTORQ8N122 1335 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 STRNO43815 780 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 MAP3K21Q5TCX8 1036 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 TRMT44Q8IYL2 757 aaKnown RBP17.65■□□□□ 0.42
SNRPN-202ENST00000390687 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 APBA2Q99767 749 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 SLF1Q9BQI6 1058 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 NBPF3Q9H094 633 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 MROH8Q9H579 483 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 HMX1Q9NP08 348 aaPredicted RBP17.65■□□□□ 0.42
SNRPN-202ENST00000390687 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
SNRPN-202ENST00000390687 HOXC6P09630 235 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
SNRPN-202ENST00000390687 NOVP48745 357 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 SLFN13Q68D06 897 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 NCAPG2Q86XI2 1143 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 PRPF38AQ8NAV1 312 aaKnown RBP17.64■□□□□ 0.41
SNRPN-202ENST00000390687 NPLOC4Q8TAT6 608 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPN-202ENST00000390687 FLRT1Q9NZU1 646 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
SNRPN-202ENST00000390687 STX8Q9UNK0 236 aa17.64■□□□□ 0.41
SNRPN-202ENST00000390687 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
SNRPN-202ENST00000390687 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
SNRPN-202ENST00000390687 ADORA2AP29274 412 aa17.63■□□□□ 0.41
SNRPN-202ENST00000390687 STAT3P40763 770 aa17.63■□□□□ 0.41
SNRPN-202ENST00000390687 CACNB2Q08289 660 aaPredicted RBP17.63■□□□□ 0.41
SNRPN-202ENST00000390687 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
SNRPN-202ENST00000390687 UBE2Q1Q7Z7E8 422 aa17.63■□□□□ 0.41
SNRPN-202ENST00000390687 CRISPLD2Q9H0B8 497 aa17.63■□□□□ 0.41
SNRPN-202ENST00000390687 IL25Q9H293 177 aa17.63■□□□□ 0.41
SNRPN-202ENST00000390687 SLC25A27O95847 323 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 BMP3P12645 472 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 AKNAD1Q5T1N1 836 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 DPP9Q86TI2 863 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 RIOX2Q8IUF8 465 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 TBC1D10CQ8IV04 446 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 COL11A1P12107 1806 aaPredicted RBP17.62■□□□□ 0.41
SNRPN-202ENST00000390687 ZNF213O14771 459 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 COBLO75128 1261 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 IGHA2P01877 340 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 MFSD6Q6ZSS7 791 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 STAG1Q8WVM7 1258 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 KIFC2Q96AC6 838 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 GMCL1Q96IK5 515 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 DSCC1Q9BVC3 393 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
SNRPN-202ENST00000390687 CAPN2P17655 700 aa17.61■□□□□ 0.41
SNRPN-202ENST00000390687 MCCP23508 829 aa17.61■□□□□ 0.41
SNRPN-202ENST00000390687 ABRAQ8N0Z2 381 aa17.61■□□□□ 0.41
SNRPN-202ENST00000390687 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
SNRPN-202ENST00000390687 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
SNRPN-202ENST00000390687 FCER1AP12319 257 aa17.6■□□□□ 0.41
SNRPN-202ENST00000390687 CCND3P30281 292 aaPredicted RBP17.6■□□□□ 0.41
SNRPN-202ENST00000390687 SLC1A4P43007 532 aa17.6■□□□□ 0.41
SNRPN-202ENST00000390687 PRPF38BQ5VTL8 546 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms