RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 INHAP05111 366 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 GJB1P08034 283 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 CCL5P13501 91 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 REPS2Q8NFH8 660 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 ATG4CQ96DT6 458 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 MOV10L1Q9BXT6 1211 aaKnown RBP13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 SPATC1LQ9H0A9 340 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 IL25Q9H293 177 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 HOXC6P09630 235 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 PTPREP23469 700 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 UBXN2AP68543 259 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 GRB14Q14449 540 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 TMEM132BQ14DG7 1078 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 TRIB2Q92519 343 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 SHISA4Q96DD7 197 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 TCP11L1Q9NUJ3 509 aa13.51□□□□□ -0.25
IGHV4-28-201ENST00000390612 VWA5AO00534 786 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 HMGCRP04035 888 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 CYP2B6P20813 491 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 GJA8P48165 433 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 MAP2K5Q13163 448 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 UBE2Q1Q7Z7E8 422 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 ZNF214Q9UL59 606 aaPredicted RBP13.5□□□□□ -0.25
IGHV4-28-201ENST00000390612 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 TSPY2A6NKD2 308 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 STRNO43815 780 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 NMT2O60551 498 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 CAPN2P17655 700 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 ERCC3P19447 782 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 CHMLP26374 656 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 RGS2P41220 211 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 HAND2P61296 217 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 TRIM32Q13049 653 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 ABRAQ8N0Z2 381 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 PRPF38AQ8NAV1 312 aaKnown RBP13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 GMCL1Q96IK5 515 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 MROH8Q9H579 483 aa13.49□□□□□ -0.25
IGHV4-28-201ENST00000390612 RAD50Q92878 1312 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 ATP2A1O14983 1001 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 PLA2G6O60733 806 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 SGPL1O95470 568 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 NT5C2P49902 561 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 CCL14Q16627 93 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 RCSD1Q6JBY9 416 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 APBA2Q99767 749 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 MCM3APO60318 1980 aa13.48□□□□□ -0.25
IGHV4-28-201ENST00000390612 RPTORQ8N122 1335 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 ZNF213O14771 459 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 SLC25A27O95847 323 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 BMP3P12645 472 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 STAT3P40763 770 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 FLRT1Q9NZU1 646 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
IGHV4-28-201ENST00000390612 NEDD4P46934 1319 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 SGSM2O43147 1006 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 COBLO75128 1261 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 ZKSCAN1P17029 563 aaPredicted RBP13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 ADORA2AP29274 412 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 TTC14Q96N46 770 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms