RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 DAGLBQ8NCG7 672 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 BAG1Q99933 345 aaPredicted RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 GOLGA6L9A6NEM1 432 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 IL17AQ16552 155 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 SYNRGQ9UMZ2 1314 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
SCFD2-201ENST00000388940 HSP90AA4PQ58FG1 418 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 HOMER1Q86YM7 354 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
SCFD2-201ENST00000388940 ADRA2BP18089 450 aa16.96■□□□□ 0.31
SCFD2-201ENST00000388940 MCM7P33993 719 aa16.96■□□□□ 0.31
SCFD2-201ENST00000388940 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
SCFD2-201ENST00000388940 STAG2Q8N3U4 1231 aa16.96■□□□□ 0.31
SCFD2-201ENST00000388940 LZTS2Q9BRK4 669 aa16.96■□□□□ 0.31
SCFD2-201ENST00000388940 USP21Q9UK80 565 aa16.96■□□□□ 0.31
SCFD2-201ENST00000388940 ADAMTS3O15072 1205 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 PBX1P40424 430 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 CCDC148Q8NFR7 591 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.3
SCFD2-201ENST00000388940 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 PPP2R2CQ9Y2T4 447 aa16.96■□□□□ 0.3
SCFD2-201ENST00000388940 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
SCFD2-201ENST00000388940 TSPY3P0CV98 308 aa16.95■□□□□ 0.3
SCFD2-201ENST00000388940 TSPY8P0CW00 308 aa16.95■□□□□ 0.3
SCFD2-201ENST00000388940 CASP1P29466 404 aa16.95■□□□□ 0.3
SCFD2-201ENST00000388940 GRIK5Q16478 980 aa16.95■□□□□ 0.3
SCFD2-201ENST00000388940 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
SCFD2-201ENST00000388940 PANX2Q96RD6 677 aa16.95■□□□□ 0.3
SCFD2-201ENST00000388940 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
SCFD2-201ENST00000388940 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 PTPN21Q16825 1174 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
SCFD2-201ENST00000388940 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 ARID3AQ99856 593 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.94■□□□□ 0.34e-8■■■□□ 17
SCFD2-201ENST00000388940 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 LRRC10BA6NIK2 292 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 IL1R1P14778 569 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 RASA1P20936 1047 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 ADKP55263 362 aaKnown RBP16.94■□□□□ 0.3
SCFD2-201ENST00000388940 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 MTRQ99707 1265 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
SCFD2-201ENST00000388940 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 DNAI1Q9UI46 699 aa16.94■□□□□ 0.3
SCFD2-201ENST00000388940 AKR1B15C9JRZ8 316 aaPredicted RBP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 TXLNAP40222 546 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 GPSM2P81274 684 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 SLC35G1Q2M3R5 365 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 FILIP1LQ4L180 1135 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 KLHL10Q6JEL2 608 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 GPKOWQ92917 476 aaPredicted RBP eCLIP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 TMEM47Q9BQJ4 181 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 NAA15Q9BXJ9 866 aaKnown RBP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 RWDD2AQ9UIY3 292 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 PCDHA6Q9UN73 950 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 PCDHA8Q9Y5H6 950 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 LAD1O00515 517 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 CYTH3O43739 400 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 PLCG2P16885 1265 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 STX17P56962 302 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 WWC2Q6AWC2 1192 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 TYW1BQ6NUM6 668 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 RPGRQ92834 1020 aaKnown RBP16.93■□□□□ 0.3
SCFD2-201ENST00000388940 OGFRQ9NZT2 677 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
SCFD2-201ENST00000388940 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 ITIH6Q6UXX5 1313 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 STXBP3O00186 592 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 TEX33O43247 280 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 SMARCA1P28370 1054 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 C16orf86Q6ZW13 317 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 LIMA1Q9UHB6 759 aaKnown RBP16.92■□□□□ 0.3
SCFD2-201ENST00000388940 MYH1P12882 1939 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 BTDP43251 543 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms