RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 RNF208Q9H0X6 261 aa-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TOR3AQ9H497 397 aa-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PRR34Q9NV39 138 aa-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FAM120CQ9NX05 1096 aaKnown RBP-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 COL20A1Q9P218 1284 aa-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DNMT3BQ9UBC3 853 aaKnown RBP-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ARID1AO14497 2285 aa-1.17□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SETD2Q9BYW2 2564 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 A0A1B0GUV1 79 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 A0A1W2PNR3 127 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 GRID2IPA4D2P6 1211 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C4orf47A7E2U8 309 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 EPHB6O15197 1021 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 BUB1BO60566 1050 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 GM2AP17900 193 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PDE6BP35913 854 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 IL6STP40189 918 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FXR1P51114 621 aaKnown RBP eCLIP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DSCR10P59022 87 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 POU4F1Q01851 419 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TLE4Q04727 773 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SOX4Q06945 474 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SFSWAPQ12872 951 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NEUROD1Q13562 356 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF260Q3ZCT1 412 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 INTS6LQ5JSJ4 861 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FDX2Q6P4F2 183 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RSRC2Q7L4I2 434 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 VRK3Q8IV63 474 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FGFRL1Q8N441 504 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C1orf127Q8N9H9 656 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 BOLLQ8N9W6 283 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 UBASH3BQ8TF42 649 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LYZL4Q96KX0 146 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 UBE2OQ9C0C9 1292 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MANSC1Q9H8J5 431 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NPDC1Q9NQX5 325 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DNAJB12Q9NXW2 375 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SCHIP1Q9P0W5 487 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 BCS1LQ9Y276 419 aa-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 AMMECR1Q9Y4X0 333 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1340P-201ENST00000384438 EPPK1P58107 5090 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HMCN2Q8NDA2 5059 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KIR2DS1A0A191URI9 304 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 OR14I1A6ND48 311 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HMX3A6NHT5 357 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TGFBR3LH3BV60 316 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 WNT10BO00744 389 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TRIM66O15016 1216 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SEC24DO94855 1032 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MATN4O95460 622 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PEX11BO96011 259 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CELA2AP08217 269 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CSF2RBP32927 897 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 THBS2P35442 1172 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MAPK8P45983 427 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LIMS1P48059 325 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 EPHB4P54760 987 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KIAA2012Q0VF49 1180 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KIR2DS1Q14954 304 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF239Q16600 458 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KRTAP6-3Q3LI67 103 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HS1BP3Q53T59 392 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LRP10Q7Z4F1 713 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TREML1Q86YW5 311 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NPAS4Q8IUM7 802 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LILRA2Q8N149 483 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DTX3Q8N9I9 347 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DDX12PQ92771 950 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZFP91Q96JP5 570 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NLRP3Q96P20 1036 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KCTD15Q96SI1 283 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 UHRF1Q96T88 793 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C19orf44Q9H6X5 657 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PRDM10Q9NQV6 1147 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FOXD4L1Q9NU39 408 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF446Q9NWS9 450 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 GPRC5BQ9NZH0 403 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CEP72Q9P209 647 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 REXO2Q9Y3B8 237 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HCN4Q9Y3Q4 1203 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 INSL6Q9Y581 213 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF804BA4D1E1 1349 aa-1.19□□□□□ -2.6
RNU6-1340P-201ENST00000384438 COL4A3Q01955 1670 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DNAJC25-GNG10A0A024R161 153 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DDX3YO15523 660 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KRT33AO76009 404 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CAMTA2O94983 1202 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ITGB1P05556 798 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NFICP08651 508 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MSL3P1P0C860 447 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MS4A1P11836 297 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CKBP12277 381 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LMNB1P20700 586 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RPL10P27635 214 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZXDBP98169 803 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HOXA4Q00056 320 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FMR1Q06787 632 aaKnown RBP eCLIP-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms