RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 VAMP4O75379 141 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 NR1D1P20393 614 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 LMNB2Q03252 620 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 MAN1A2O60476 641 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 CASP8Q14790 479 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 SHANK2Q9UPX8 1470 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 TTC4O95801 387 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 ARHGEF18Q6ZSZ5 1173 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 NNTQ13423 1086 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 BBOF1Q8ND07 529 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 LSM14BQ9BX40 385 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 DPH5Q9H2P9 285 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 MAN1A1P33908 653 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 SLC12A2P55011 1212 aa13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 ZC3H18Q86VM9 953 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-202ENST00000383836 RANBP1P43487 201 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 RCN2Q14257 317 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 PFKFB1P16118 471 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 TFCP2Q12800 502 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 PPWD1Q96BP3 646 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 ORC6Q9Y5N6 252 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 CEP70Q8NHQ1 597 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 DAPK3O43293 454 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 SLC35F6Q8N357 371 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 USP6NLQ92738 828 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 ATF2P15336 505 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 OGFOD1Q8N543 542 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 RGS12O14924 1447 aa13.61□□□□□ -0.23
SRGAP3-202ENST00000383836 KDM5DQ9BY66 1539 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 ATICP31939 592 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 ADAM21Q9UKJ8 722 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 TRPA1O75762 1119 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 STAT1P42224 750 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 EXOC7Q9UPT5 735 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 AFG3L2Q9Y4W6 797 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 SLC8A3P57103 927 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 PPP2R5DQ14738 602 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 ANXA1P04083 346 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 ME3Q16798 604 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 EFHD1Q9BUP0 239 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 YIPF3Q9GZM5 350 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 ANLNQ9NQW6 1124 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 SLFNL1Q499Z3 407 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 NLRC4Q9NPP4 1024 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 CUL4BQ13620 913 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 KRT80Q6KB66 452 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 PALMDQ9NP74 551 aa13.6□□□□□ -0.23
SRGAP3-202ENST00000383836 TRIM37O94972 964 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 EPB41L5Q9HCM4 733 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 SUFUQ9UMX1 484 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 JAK2O60674 1132 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 STRN3Q13033 797 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 TRIM42Q8IWZ5 723 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 BLZF1Q9H2G9 400 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 H7C1D1 291 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 BAG5Q9UL15 447 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 XRCC5P13010 732 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 U2AF1L4Q8WU68 220 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 B4E1Z4 1266 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
SRGAP3-202ENST00000383836 ZMYND10O75800 440 aa13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 GCNT3O95395 438 aa13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 ZFXP17010 805 aaPredicted RBP13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 PPP2R5BQ15173 497 aa13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 OTUD7AQ8TE49 926 aaPredicted RBP13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 SATB2Q9UPW6 733 aa13.58□□□□□ -0.23
SRGAP3-202ENST00000383836 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
SRGAP3-202ENST00000383836 PPP2R5CQ13362 524 aa13.58□□□□□ -0.24
SRGAP3-202ENST00000383836 CALCRLQ16602 461 aa13.58□□□□□ -0.24
SRGAP3-202ENST00000383836 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
SRGAP3-202ENST00000383836 ABCB4P21439 1286 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms