RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 F13A1P00488 732 aa14.34□□□□□ -0.11
CIITA-202ENST00000381835 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
CIITA-202ENST00000381835 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
CIITA-202ENST00000381835 NBPF12Q5TAG4 269 aaPredicted RBP14.34□□□□□ -0.11
CIITA-202ENST00000381835 OTUD7BQ6GQQ9 843 aa14.34□□□□□ -0.11
CIITA-202ENST00000381835 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
CIITA-202ENST00000381835 ALG1Q9BT22 464 aa14.34□□□□□ -0.11
CIITA-202ENST00000381835 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
CIITA-202ENST00000381835 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 GLTPD2A6NH11 291 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 FIBPO43427 364 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 RAD21O60216 631 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 GUCY1A2P33402 732 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.11
CIITA-202ENST00000381835 ICA1Q05084 483 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 GRM4Q14833 912 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.11
CIITA-202ENST00000381835 C8orf76Q96K31 380 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.11
CIITA-202ENST00000381835 USP17L5A8MUK1 530 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 PIBF1Q8WXW3 757 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
CIITA-202ENST00000381835 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
CIITA-202ENST00000381835 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 FUT2Q10981 343 aa14.32□□□□□ -0.12
CIITA-202ENST00000381835 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 RNF26Q9BY78 433 aaPredicted RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 MAP3K10Q02779 954 aa14.32□□□□□ -0.12
CIITA-202ENST00000381835 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
CIITA-202ENST00000381835 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
CIITA-202ENST00000381835 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 NYAP2Q9P242 653 aa14.32□□□□□ -0.12
CIITA-202ENST00000381835 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
CIITA-202ENST00000381835 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
CIITA-202ENST00000381835 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 DEXIO95424 95 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 PDHBP11177 359 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 EPHX2P34913 555 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 CAP2P40123 477 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 MYRIPQ8NFW9 859 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 FBXO18Q8NFZ0 1043 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 WASF1Q92558 559 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 FRMPD2Q68DX3 1309 aaPredicted RBP14.31□□□□□ -0.12
CIITA-202ENST00000381835 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
CIITA-202ENST00000381835 GNAQP50148 359 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 DCPSQ96C86 337 aaKnown RBP14.31□□□□□ -0.12
CIITA-202ENST00000381835 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
CIITA-202ENST00000381835 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
CIITA-202ENST00000381835 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 MKL1Q969V6 931 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 PRIMPOLQ96LW4 560 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 ARID3AQ99856 593 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 FZD1Q9UP38 647 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 PITPNM2Q9BZ72 1349 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 TRIM29Q14134 588 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 DCAF15Q66K64 600 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 KRT40Q6A162 431 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 DLK2Q6UY11 383 aa14.3□□□□□ -0.12
CIITA-202ENST00000381835 ECE1P42892 770 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 DNM1Q05193 864 aaKnown RBP14.29□□□□□ -0.12
CIITA-202ENST00000381835 PKN1Q16512 942 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
CIITA-202ENST00000381835 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
CIITA-202ENST00000381835 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
CIITA-202ENST00000381835 SULF1Q8IWU6 871 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 PPP2R3BQ9Y5P8 575 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 SCN4AP35499 1836 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 A0A1W2PRG0 241 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 ADM5C9JUS6 153 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 CYTH3O43739 400 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 ASNSP08243 561 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 ARHGEF10LQ9HCE6 1279 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
CIITA-202ENST00000381835 IQCA1LA6NCM1 817 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 SLC1A4P43007 532 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 RESTQ13127 1097 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 PRKG1Q13976 671 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 SLFN13Q68D06 897 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 KCTD1Q719H9 257 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 ACER1Q8TDN7 264 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 LZTS2Q9BRK4 669 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 VPS54Q9P1Q0 977 aa14.28□□□□□ -0.12
CIITA-202ENST00000381835 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms