RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CCDC69A6NI79 296 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 ALDH1A1P00352 501 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 BMP3P12645 472 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 SLC1A4P43007 532 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 NEK4P51957 841 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 TOB2Q14106 344 aaPredicted RBP18.1■□□□□ 0.49
PDGFB-202ENST00000381551 FAM83BQ5T0W9 1011 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 MTMR7Q9Y216 660 aa18.1■□□□□ 0.49
PDGFB-202ENST00000381551 LOC285556D6RIA3 1793 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 OSBPP22059 807 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 EVCP57679 992 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 MAP2K1Q02750 393 aaPredicted RBP18.09■□□□□ 0.49
PDGFB-202ENST00000381551 COG2Q14746 738 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 BRF1Q92994 677 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 P2RX7Q99572 595 aaKnown RBP18.09■□□□□ 0.49
PDGFB-202ENST00000381551 ASCC2Q9H1I8 757 aaPredicted RBP18.09■□□□□ 0.49
PDGFB-202ENST00000381551 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
PDGFB-202ENST00000381551 CYP2C8P10632 490 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 ZNF543Q08ER8 600 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 KCTD1Q719H9 257 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 JMYQ8N9B5 988 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 MAP3K14Q99558 947 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
PDGFB-202ENST00000381551 PALM3A6NDB9 673 aaPredicted RBP18.07■□□□□ 0.48
PDGFB-202ENST00000381551 TMEM232C9JQI7 657 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 CA12O43570 354 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 PLA2G6O60733 806 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 DDAH1O94760 285 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 APOBRQ0VD83 1088 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 RABEP1Q15276 862 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 APOA5Q6Q788 366 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 FBXO28Q9NVF7 368 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 WBP1LQ9NX94 342 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 FEM1BQ9UK73 627 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 PNMA3Q9UL41 463 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 PCNTO95613 3336 aa18.07■□□□□ 0.48
PDGFB-202ENST00000381551 FRMPD2Q68DX3 1309 aaPredicted RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 TRPA1O75762 1119 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 FLOT1O75955 427 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 PARP1P09874 1014 aaKnown RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 GOLGA8HP0CJ92 632 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CALM1P0DP23 149 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CALM2P0DP24 149 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CALM3P0DP25 149 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 DSG3P32926 999 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 AK2P54819 239 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 GRM4Q14833 912 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 TAF1CQ15572 869 aaPredicted RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CCDC96Q2M329 555 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 TTBK2Q6IQ55 1244 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 POTEEQ6S8J3 1075 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 FANCBQ8NB91 859 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 NUP133Q8WUM0 1156 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 PARK7Q99497 189 aaKnown RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
PDGFB-202ENST00000381551 CFHR5Q9BXR6 569 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 ZFYVE28Q9HCC9 887 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
PDGFB-202ENST00000381551 ZBTB43O43298 467 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 HERVK_113P62684 666 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 CRHR2Q13324 411 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 STAG2Q8N3U4 1231 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 SLF1Q9BQI6 1058 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 R3HDMLQ9H3Y0 253 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 PPP1R9AQ9ULJ8 1098 aa18.05■□□□□ 0.48
PDGFB-202ENST00000381551 MYPNQ86TC9 1320 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 TLR2O60603 784 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 RXRAP19793 462 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 PDIA3P30101 505 aaKnown RBP18.04■□□□□ 0.48
PDGFB-202ENST00000381551 SLC16A2P36021 539 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 STAT2P52630 851 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 RCAN1P53805 252 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 LBX2Q6XYB7 198 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 ZNF274Q96GC6 653 aaPredicted RBP18.04■□□□□ 0.48
PDGFB-202ENST00000381551 SAGE1Q9NXZ1 904 aa18.04■□□□□ 0.48
PDGFB-202ENST00000381551 ISY1Q9ULR0 285 aaKnown RBP18.04■□□□□ 0.48
PDGFB-202ENST00000381551 HPS5Q9UPZ3 1129 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms