RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZBTB43O43298 467 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 CHRNDQ07001 517 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 MAP3K12Q12852 859 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 TSR1Q2NL82 804 aaKnown RBP15.6■□□□□ 0.09
SDC1-202ENST00000381150 RESP18Q5W5W9 173 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 SGMS1Q86VZ5 419 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 MLKLQ8NB16 471 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 LY9Q9HBG7 655 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 CTNND2Q9UQB3 1225 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 SHTN1A0MZ66 631 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 MACROD2A1Z1Q3 448 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 MBD4O95243 580 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 MAP2K2P36507 400 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 SETQ01105 290 aaPredicted RBP15.59■□□□□ 0.09
SDC1-202ENST00000381150 TBX2Q13207 712 aaPredicted RBP15.59■□□□□ 0.09
SDC1-202ENST00000381150 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 EFCAB13Q8IY85 973 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 DIS3L2Q8IYB7 885 aaKnown RBP15.59■□□□□ 0.09
SDC1-202ENST00000381150 TMEM87BQ96K49 555 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 ZSWIM5Q9P217 1185 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 TMEM67Q5HYA8 995 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 MMS22LQ6ZRQ5 1243 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 RASSF8Q8NHQ8 419 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 JPH2Q9BR39 696 aaPredicted RBP15.59■□□□□ 0.09
SDC1-202ENST00000381150 CAPN7Q9Y6W3 813 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 FAM169AQ9Y6X4 670 aa15.59■□□□□ 0.09
SDC1-202ENST00000381150 SYNRGQ9UMZ2 1314 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 WTIPA6NIX2 430 aaPredicted RBP15.58■□□□□ 0.09
SDC1-202ENST00000381150 PRKAB2O43741 272 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 GNGT1P63211 74 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 ATP2B2Q01814 1243 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 CCDC122Q5T0U0 273 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 CCDC91Q7Z6B0 441 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 CHP1Q99653 195 aa15.58■□□□□ 0.09
SDC1-202ENST00000381150 GNL3LQ9NVN8 582 aaKnown RBP15.58■□□□□ 0.09
SDC1-202ENST00000381150 GEMIN8Q9NWZ8 242 aaKnown RBP15.58■□□□□ 0.09
SDC1-202ENST00000381150 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 INPP5BP32019 993 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 CTDSPL2Q05D32 466 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 CLEC4GQ6UXB4 293 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 SND1Q7KZF4 910 aaKnown RBP eCLIP15.58■□□□□ 0.082e-8■■■□□ 15
SDC1-202ENST00000381150 MED4Q9NPJ6 270 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 PCDHB6Q9Y5E3 794 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 ZNF804BA4D1E1 1349 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.08
SDC1-202ENST00000381150 ZNF185O15231 689 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 CDKL5O76039 1030 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 SSBP05455 408 aaKnown RBP eCLIP15.58■□□□□ 0.08
SDC1-202ENST00000381150 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
SDC1-202ENST00000381150 MAP9Q49MG5 647 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 MCTP2Q6DN12 878 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 LCORLQ8N3X6 602 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 ENOX1Q8TC92 643 aaKnown RBP15.58■□□□□ 0.08
SDC1-202ENST00000381150 HNRNPLLQ8WVV9 542 aaKnown RBP15.58■□□□□ 0.08
SDC1-202ENST00000381150 EPSTI1Q96J88 318 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 MMS19Q96T76 1030 aa15.58■□□□□ 0.08
SDC1-202ENST00000381150 A0A087WUV0 522 aaPredicted RBP15.57■□□□□ 0.08
SDC1-202ENST00000381150 A0A0G2JS52 829 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 GOLGA6BA6NDN3 693 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 KIAA0754O94854 1291 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 LIFRP42702 1097 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 NR1I3Q14994 352 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 BRMS1Q9HCU9 246 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 HPSEQ9Y251 543 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 SLC12A7Q9Y666 1083 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 MFAP3LO75121 409 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
SDC1-202ENST00000381150 TDO2P48775 406 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 SSRP1Q08945 709 aaKnown RBP15.57■□□□□ 0.08
SDC1-202ENST00000381150 SF3A3Q12874 501 aaKnown RBP eCLIP15.57■□□□□ 0.08
SDC1-202ENST00000381150 PTPAQ15257 358 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
SDC1-202ENST00000381150 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 PPP6R2O75170 966 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 ATP2C2O75185 946 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 CNGA4Q8IV77 575 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 CSRNP2Q9H175 543 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 NDUFAB1O14561 156 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 SLC7A5Q01650 507 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 UBXN1Q04323 297 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 C2orf54Q08AI8 447 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 AKNAD1Q5T1N1 836 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 ADGRA1Q86SQ6 560 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 MSANTD4Q8NCY6 345 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 MED15Q96RN5 788 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 RAB21Q9UL25 225 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 NUTM2BA6NNL0 878 aaPredicted RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 NUTM2EB1AL46 878 aaPredicted RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
SDC1-202ENST00000381150 ATP1A1P05023 1023 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms