RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PAF1Q8N7H5 531 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 SH3RF3Q8TEJ3 882 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-203ENST00000380877 LZTFL1Q9NQ48 299 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 CETN3O15182 167 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 CYP2D6P10635 497 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 CDK8P49336 464 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 PCDHA12Q9UN75 941 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-203ENST00000380877 DGKHQ86XP1 1220 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 CGNQ9P2M7 1197 aaKnown RBP13.72□□□□□ -0.21
GABPB1-203ENST00000380877 NEDD4P46934 1319 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 ZNF827Q17R98 1081 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 MCTP2Q6DN12 878 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 MB21D2Q8IYB1 491 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-203ENST00000380877 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
GABPB1-203ENST00000380877 GSG1L2A8MUP6 293 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 PPP6R2O75170 966 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 TACC1O75410 805 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 USP17L2Q6R6M4 530 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 NELFBQ8WX92 580 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 DCP1AQ9NPI6 582 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-203ENST00000380877 PI4KBQ9UBF8 816 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 PXDNQ92626 1479 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.21
GABPB1-203ENST00000380877 C21orf2O43822 256 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 PRR16Q569H4 304 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 CYB5R4Q7L1T6 521 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 KAZALD1Q96I82 304 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
GABPB1-203ENST00000380877 DYNC1I1O14576 645 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 NTSR2O95665 410 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 CHGBP05060 677 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 NT5C2P49902 561 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-203ENST00000380877 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.22
GABPB1-203ENST00000380877 AMNQ9BXJ7 453 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.22
GABPB1-203ENST00000380877 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-203ENST00000380877 GDF11O95390 407 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 EPB41P11171 864 aaKnown RBP13.7□□□□□ -0.22
GABPB1-203ENST00000380877 ALAS1P13196 640 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 FRMD4BQ9Y2L6 1034 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 MRPL11Q9Y3B7 192 aaKnown RBP13.7□□□□□ -0.22
GABPB1-203ENST00000380877 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 GAS7O60861 476 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 LEKR1Q6ZMV7 388 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 XPO4Q9C0E2 1151 aaKnown RBP13.7□□□□□ -0.22
GABPB1-203ENST00000380877 PCDHA5Q9Y5H7 936 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-203ENST00000380877 KCTD1Q719H9 257 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 AS3MTQ9HBK9 375 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 LONP1P36776 959 aaKnown RBP13.7□□□□□ -0.22
GABPB1-203ENST00000380877 TRIM14Q14142 442 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 CSADQ9Y600 493 aa13.7□□□□□ -0.22
GABPB1-203ENST00000380877 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 TAF3Q5VWG9 929 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 SYT10Q6XYQ8 523 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 PIGSQ96S52 555 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 IMPACTQ9P2X3 320 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 DKC1O60832 514 aaKnown RBP eCLIP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 SLC16A2P36021 539 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 TRIML1Q8N9V2 468 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTNNBL1Q8WYA6 563 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 RRP9O43818 475 aaKnown RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 SMTNP53814 917 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 GPSM2P81274 684 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 MAEAQ7L5Y9 396 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 NELFCDQ8IXH7 590 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 ZNF609O15014 1411 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTAGE8P0CG41 777 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTAGE6Q86UF2 777 aa13.69□□□□□ -0.22
GABPB1-203ENST00000380877 CTAGE4Q8IX94 777 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms