RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 CFBP00751 764 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 HS2ST1Q7LGA3 356 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 TRIM42Q8IWZ5 723 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 DCLK2Q8N568 766 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 KLHL23Q8NBE8 558 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 MBD4O95243 580 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 OCA2Q04671 838 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 STRN3Q13033 797 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 FAM182BQ5T319 152 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 CNGA4Q8IV77 575 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 KIF9Q9HAQ2 790 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 SLC8A3P57103 927 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 TEX9Q8N6V9 391 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 ARHGAP42A6NI28 874 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 STX10O60499 249 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 RAP1GDS1P52306 607 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 SUN1O94901 812 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 TXKP42681 527 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 HIBCHQ6NVY1 386 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 ECE1P42892 770 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 TLK2Q86UE8 772 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 ANGPTL3Q9Y5C1 460 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 STXBP3O00186 592 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 PSMA7O14818 248 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 CPA1P15085 419 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 ACTN3Q08043 901 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 C8orf34Q49A92 452 aa11.83□□□□□ -0.52
CLCN4-202ENST00000380833 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-202ENST00000380833 ADGRL1O94910 1474 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PIK3R4Q99570 1358 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ARPP19P56211 112 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PPIP5K2O43314 1243 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 CD19P15391 556 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SERPINB6P35237 376 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 DMPKQ09013 629 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 CLUL1Q15846 466 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 DYMQ7RTS9 669 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ANLNQ9NQW6 1124 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SAT1P21673 171 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PDE6BP35913 854 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 KLHL29Q96CT2 875 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ST7Q9NRC1 585 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 TRAF5O00463 557 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SPOPO43791 374 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PDHA1P08559 390 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SCNN1DP51172 638 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PIK3AP1Q6ZUJ8 805 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 PSMB7Q99436 277 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 DDX28Q9NUL7 540 aaKnown RBP11.82□□□□□ -0.52
CLCN4-202ENST00000380833 B4E1Z4 1266 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 WDR46O15213 610 aaKnown RBP11.82□□□□□ -0.52
CLCN4-202ENST00000380833 TSPAN9O75954 239 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
CLCN4-202ENST00000380833 DNM1Q05193 864 aaKnown RBP11.82□□□□□ -0.52
CLCN4-202ENST00000380833 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
CLCN4-202ENST00000380833 GLG1Q92896 1179 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 SLC4A7Q9Y6M7 1214 aa11.82□□□□□ -0.52
CLCN4-202ENST00000380833 GRM8O00222 908 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 FAM167BQ9BTA0 163 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 MYO1AQ9UBC5 1043 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 GJA8P48165 433 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
CLCN4-202ENST00000380833 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms