RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 BRD3Q15059 726 aa14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 KCTD19Q17RG1 926 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 TNS3Q68CZ2 1445 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 A0A087WUV0 522 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 ZNF18P17022 549 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 NR1I3Q14994 352 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 TTC38Q5R3I4 469 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 ADGRG1Q9Y653 693 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 NWD2Q9ULI1 1742 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 MST1RQ04912 1400 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 PPFIA4O75335 1185 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 SCP2P22307 547 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 TRIM28Q13263 835 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 L1RE1Q9UN81 338 aa14.02□□□□□ -0.17
PRPF40B-202ENST00000380281 EXOC5O00471 708 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 CASP8Q14790 479 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 KCNV1Q6PIU1 500 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 IQCA1Q86XH1 822 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 JPH2Q9BR39 696 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 FOXP1Q9H334 677 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 CEP131Q9UPN4 1083 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 CAMTA1Q9Y6Y1 1673 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 TSPY2A6NKD2 308 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 TULP1O00294 542 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 VSNL1P62760 191 aa14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-202ENST00000380281 CPP00450 1065 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 GYPCP04921 128 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 MATR3P43243 847 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF40B-202ENST00000380281 TBX2Q13207 712 aaPredicted RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 KRT31Q15323 416 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 PKN1Q16512 942 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 SPATA1Q5VX52 437 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 GSPT2Q8IYD1 628 aaKnown RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 CCT5P48643 541 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 PPP2R5AQ15172 486 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 NOA1Q8NC60 698 aaKnown RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 HPS3Q969F9 1004 aa14□□□□□ -0.17
PRPF40B-202ENST00000380281 RNF41Q9H4P4 317 aaPredicted RBP14□□□□□ -0.17
PRPF40B-202ENST00000380281 RNF40O75150 1001 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 NELFBQ8WX92 580 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 STX8Q9UNK0 236 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 ENOX2Q16206 610 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 ABCC6O95255 1503 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 PRDX5P30044 214 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 ERVK-24P63145 666 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 GPR101Q96P66 508 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 EHD4Q9H223 541 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 MED4Q9NPJ6 270 aa13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 ADD3Q9UEY8 706 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-202ENST00000380281 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 A0A1B0GTH6 734 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 MACROD2A1Z1Q3 448 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 FGFR2P21802 821 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 KLK7P49862 253 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 SATB1Q01826 763 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 SRGAP1Q7Z6B7 1085 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 STAG1Q8WVM7 1258 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 ERLIN1O75477 346 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 FAM71BQ8TC56 605 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 POLD4Q9HCU8 107 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 ABCC12Q96J65 1359 aa13.98□□□□□ -0.17
PRPF40B-202ENST00000380281 MFAP3LO75121 409 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 STAT6P42226 847 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 STAG2Q8N3U4 1231 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 MCM9Q9NXL9 1143 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 XDHP47989 1333 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 ZPR1O75312 459 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 HEATR3Q7Z4Q2 680 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms