RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TMEM132BQ14DG7 1078 aa27.77■■■□□ 2.04
U2AF1-202ENST00000380276 ZSCAN25Q6NSZ9 544 aa27.77■■■□□ 2.04
U2AF1-202ENST00000380276 C16orf86Q6ZW13 317 aa27.77■■■□□ 2.04
U2AF1-202ENST00000380276 MAML3Q96JK9 1138 aa27.77■■■□□ 2.04
U2AF1-202ENST00000380276 SLC25A27O95847 323 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 UBE3CQ15386 1083 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 SLC39A5Q6ZMH5 540 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 ABRAQ8N0Z2 381 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 STK11IPQ8N1F8 1099 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 FERMT2Q96AC1 680 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 GOPCQ9HD26 462 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 FBXO28Q9NVF7 368 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 MYH7P12883 1935 aa27.76■■■□□ 2.03
U2AF1-202ENST00000380276 IGHA2P01877 340 aa27.75■■■□□ 2.03
U2AF1-202ENST00000380276 FAM161BQ96MY7 647 aa27.75■■■□□ 2.03
U2AF1-202ENST00000380276 LRRCC1Q9C099 1032 aa27.75■■■□□ 2.03
U2AF1-202ENST00000380276 KANSL2Q9H9L4 492 aa27.75■■■□□ 2.03
U2AF1-202ENST00000380276 SMARCA5O60264 1052 aaPredicted RBP27.74■■■□□ 2.03
U2AF1-202ENST00000380276 ADCYAP1R1P41586 468 aa27.74■■■□□ 2.03
U2AF1-202ENST00000380276 KCTD2Q14681 263 aa27.74■■■□□ 2.03
U2AF1-202ENST00000380276 TRIM60Q495X7 471 aa27.74■■■□□ 2.03
U2AF1-202ENST00000380276 FAM47AQ5JRC9 791 aa27.74■■■□□ 2.03
U2AF1-202ENST00000380276 COL11A1P12107 1806 aaPredicted RBP27.74■■■□□ 2.03
U2AF1-202ENST00000380276 PARP14Q460N5 1801 aa27.74■■■□□ 2.03
U2AF1-202ENST00000380276 PGK2P07205 417 aa27.73■■■□□ 2.03
U2AF1-202ENST00000380276 LRRC41Q15345 812 aa27.73■■■□□ 2.03
U2AF1-202ENST00000380276 FAM83BQ5T0W9 1011 aa27.73■■■□□ 2.03
U2AF1-202ENST00000380276 CTR9Q6PD62 1173 aa27.73■■■□□ 2.03
U2AF1-202ENST00000380276 PUS7LQ9H0K6 701 aaKnown RBP27.73■■■□□ 2.03
U2AF1-202ENST00000380276 XPNPEP3Q9NQH7 507 aa27.72■■■□□ 2.03
U2AF1-202ENST00000380276 ARPP21Q9UBL0 812 aaPredicted RBP27.72■■■□□ 2.03
U2AF1-202ENST00000380276 LTBP2Q14767 1821 aa27.71■■■□□ 2.03
U2AF1-202ENST00000380276 RARBP10826 455 aa27.71■■■□□ 2.03
U2AF1-202ENST00000380276 STAT3P40763 770 aa27.71■■■□□ 2.03
U2AF1-202ENST00000380276 RIOX2Q8IUF8 465 aa27.71■■■□□ 2.03
U2AF1-202ENST00000380276 PPP1R9AQ9ULJ8 1098 aa27.71■■■□□ 2.03
U2AF1-202ENST00000380276 VWA5AO00534 786 aa27.7■■■□□ 2.02
U2AF1-202ENST00000380276 SLC4A3P48751 1232 aa27.7■■■□□ 2.02
U2AF1-202ENST00000380276 MKNK2Q9HBH9 465 aa27.7■■■□□ 2.02
U2AF1-202ENST00000380276 RCAN3Q9UKA8 241 aa27.7■■■□□ 2.02
U2AF1-202ENST00000380276 COL6A3P12111 3177 aa27.7■■■□□ 2.02
U2AF1-202ENST00000380276 ZNFX1Q9P2E3 1918 aaKnown RBP27.69■■■□□ 2.02
U2AF1-202ENST00000380276 MINDY4BA8MYZ0 360 aa27.69■■■□□ 2.02
U2AF1-202ENST00000380276 BADQ92934 168 aa27.69■■■□□ 2.02
U2AF1-202ENST00000380276 ZNF697Q5TEC3 545 aa27.68■■■□□ 2.02
U2AF1-202ENST00000380276 NUP88Q99567 741 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-202ENST00000380276 TINF2Q9BSI4 451 aa27.68■■■□□ 2.02
U2AF1-202ENST00000380276 ADAMTS5Q9UNA0 930 aa27.68■■■□□ 2.02
U2AF1-202ENST00000380276 CTDP1Q9Y5B0 961 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-202ENST00000380276 PGK1P00558 417 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 COPB2P35606 906 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 SHHQ15465 462 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 RNF180Q86T96 592 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 PDLIM7Q9NR12 457 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 ECHDC1Q9NTX5 307 aa27.67■■■□□ 2.02
U2AF1-202ENST00000380276 PLXNA1Q9UIW2 1896 aa27.66■■■□□ 2.02
U2AF1-202ENST00000380276 ZNF792Q3KQV3 632 aa27.66■■■□□ 2.02
U2AF1-202ENST00000380276 SH3RF1Q7Z6J0 888 aa27.66■■■□□ 2.02
U2AF1-202ENST00000380276 SLF1Q9BQI6 1058 aa27.66■■■□□ 2.02
U2AF1-202ENST00000380276 ZNF214Q9UL59 606 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-202ENST00000380276 CNPY2Q9Y2B0 182 aa27.66■■■□□ 2.02
U2AF1-202ENST00000380276 POTEB2H3BUK9 544 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 TAL1P17542 331 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-202ENST00000380276 SNX17Q15036 470 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 C9orf50Q5SZB4 431 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 FAM109BQ6ICB4 259 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-202ENST00000380276 GPATCH3Q96I76 525 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 GUCD1Q96NT3 240 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 STRBPQ96SI9 672 aaKnown RBP27.65■■■□□ 2.02
U2AF1-202ENST00000380276 NRBP1Q9UHY1 535 aa27.65■■■□□ 2.02
U2AF1-202ENST00000380276 DNAH12Q6ZR08 3092 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 AKR1A1P14550 325 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 RASA1P20936 1047 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 TLE2Q04725 743 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 C20orf194Q5TEA3 1177 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 SNRNP48Q6IEG0 339 aaKnown RBP27.64■■■□□ 2.02
U2AF1-202ENST00000380276 LENG1Q96BZ8 264 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-202ENST00000380276 DDX11Q96FC9 970 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.64■■■□□ 2.02
U2AF1-202ENST00000380276 PHF24Q9UPV7 400 aa27.64■■■□□ 2.02
U2AF1-202ENST00000380276 DIS3Q9Y2L1 958 aaKnown RBP27.64■■■□□ 2.02
U2AF1-202ENST00000380276 TRIM43BA6NCK2 446 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 TDO2P48775 406 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 TSHZ3Q63HK5 1081 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 CPXCR1Q8N123 301 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 REPS2Q8NFH8 660 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 TRIM43Q96BQ3 446 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-202ENST00000380276 TEX13BQ9BXU2 312 aa27.63■■■□□ 2.01
U2AF1-202ENST00000380276 GSG1L2A8MUP6 293 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 F5H6K3 240 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 PQBP1O60828 265 aaKnown RBP27.62■■■□□ 2.01
U2AF1-202ENST00000380276 APPP05067 770 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 KLRC3Q07444 240 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 SBK1Q52WX2 424 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 KBTBD3Q8NAB2 608 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 APPBP2Q92624 585 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 CLIP2Q9UDT6 1046 aa27.62■■■□□ 2.01
U2AF1-202ENST00000380276 ISY1Q9ULR0 285 aaKnown RBP27.62■■■□□ 2.01
U2AF1-202ENST00000380276 NDUFB10O96000 172 aa27.61■■■□□ 2.01
U2AF1-202ENST00000380276 OSBP2Q969R2 916 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms