RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ROBO3Q96MS0 1386 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 POLRMTO00411 1230 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 DYNC1I1O14576 645 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TSPY3P0CV98 308 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TSPY8P0CW00 308 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 RASA1P20936 1047 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 GSTO1P78417 241 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 PTGDRQ13258 359 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 E2F4Q16254 413 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 NT5DC1Q5TFE4 455 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TMED8Q6PL24 325 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 OLFM4Q6UX06 510 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 FAM205AQ6ZU69 1335 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 DGKHQ86XP1 1220 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TBC1D16Q8TBP0 767 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 RASGRP4Q8TDF6 673 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 CYTH3O43739 400 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 AFMP43652 599 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TPM4P67936 248 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 IL17AQ16552 155 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TPD52L1Q16890 204 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 MFSD14BQ5SR56 506 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 BRMS1Q9HCU9 246 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 ANKRD31Q8N7Z5 1873 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 LTBP1Q14766 1721 aa9.09□□□□□ -0.95
PDLIM5-204ENST00000380176 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 TMEM232C9JQI7 657 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 GOLGA8HP0CJ92 632 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 MCM7P33993 719 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 UBASH3AP57075 661 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 RHBDL3P58872 404 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 MORC3Q14149 939 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 ANKS1AQ92625 1134 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 TRMT1Q9NXH9 659 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 IMPACTQ9P2X3 320 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 STX8Q9UNK0 236 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 NEMFO60524 1076 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 BBOX1O75936 387 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 LDHCP07864 332 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 TNNT1P13805 278 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 KIF5BP33176 963 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 ATP2C1P98194 919 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 TEX11Q8IYF3 940 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 SPATA20Q8TB22 786 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 STAMQ92783 540 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 TMEM47Q9BQJ4 181 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 NOL10Q9BSC4 688 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 FLT1P17948 1338 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 SERPINC1P01008 464 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 HOXA10P31260 410 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 GTF2F1P35269 517 aaKnown RBP eCLIP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 CDK8P49336 464 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 GOLGA8FQ08AF8 430 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 GOLGA8DPQ0D2H9 430 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 HSP90AA2PQ14568 343 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 GRM4Q14833 912 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 SLC27A3Q5K4L6 730 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 MORC2Q9Y6X9 1032 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-204ENST00000380176 MLLT3P42568 568 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 GSDMDP57764 484 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 AMOTL1Q8IY63 956 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 FAM177A1Q8N128 213 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 PAGE5Q96GU1 130 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 TCP11L1Q9NUJ3 509 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 LRRC37AA6NMS7 1700 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 FOCADQ5VW36 1801 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 CDC25AP30304 524 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 GTF2IP78347 998 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 TXNRD1Q16881 649 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 CFAP100Q494V2 611 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 WWC2Q6AWC2 1192 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 C16orf86Q6ZW13 317 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 KRT27Q7Z3Y8 459 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 BLIDQ8IZY5 108 aa9.07□□□□□ -0.96
PDLIM5-204ENST00000380176 KLRG2A4D1S0 409 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 DCAF8Q5TAQ9 597 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 ZNF710Q8N1W2 664 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 C4orf32Q8N8J7 132 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 CRAMP1Q96RY5 1269 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 EYA3Q99504 573 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 MXD3Q9BW11 206 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms