RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 STRNO43815 780 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 IGHDP01880 384 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 ERCC3P19447 782 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 TICAM2Q86XR7 235 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 CRISPLD2Q9H0B8 497 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 MROH8Q9H579 483 aa29.32■■■□□ 2.28
TNFRSF4-201ENST00000379236 FRMPD3Q5JV73 1810 aa29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 NUCB1Q02818 461 aa29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 CACNB2Q08289 660 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 MCMDC2Q4G0Z9 681 aa29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 MAP3K21Q5TCX8 1036 aa29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 SLC5A4Q9NY91 659 aa29.31■■■□□ 2.28
TNFRSF4-201ENST00000379236 F5H6K3 240 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 TTLL1O95922 423 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 KLRC3Q07444 240 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 ANKLE1Q8NAG6 615 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 CEP95Q96GE4 821 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 FBXO28Q9NVF7 368 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 PPP1R9AQ9ULJ8 1098 aa29.3■■■□□ 2.28
TNFRSF4-201ENST00000379236 SLC25A27O95847 323 aa29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 TFAP4Q01664 338 aa29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 UBE2Q1Q7Z7E8 422 aa29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 FAM227BQ96M60 508 aa29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 CTDP1Q9Y5B0 961 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 PLXNA1Q9UIW2 1896 aa29.29■■■□□ 2.28
TNFRSF4-201ENST00000379236 PLIN4Q96Q06 1357 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 IGKV6D-41A0A0C4DH26 115 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 ADORA2AP29274 412 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 FAM47AQ5JRC9 791 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 PPP4R3BQ5MIZ7 849 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 NECAB2Q7Z6G3 386 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 NEDD1Q8NHV4 660 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 NUP88Q99567 741 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 SLF1Q9BQI6 1058 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 MTMR4Q9NYA4 1195 aa29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 ISY1Q9ULR0 285 aaKnown RBP29.28■■■□□ 2.28
TNFRSF4-201ENST00000379236 A0A0D9SFI3 127 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 TSPY2A6NKD2 308 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 NDUFB10O96000 172 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 HOXC6P09630 235 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 CTDSPL2Q05D32 466 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 TMEM132BQ14DG7 1078 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 VPS53Q5VIR6 699 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 LRRC47Q8N1G4 583 aaKnown RBP29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 PAWRQ96IZ0 340 aaKnown RBP29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 SYNPO2Q9UMS6 1093 aa29.27■■■□□ 2.28
TNFRSF4-201ENST00000379236 VWA5AO00534 786 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 FCER1AP12319 257 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 CCND3P30281 292 aaPredicted RBP29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 COPB2P35606 906 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 MFAP1P55081 439 aaKnown RBP29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 NMIQ13287 307 aaPredicted RBP29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 PLEKHM2Q8IWE5 1019 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 NPLOC4Q8TAT6 608 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 NR2E3Q9Y5X4 410 aa29.26■■■□□ 2.27
TNFRSF4-201ENST00000379236 MKL1Q969V6 931 aa29.25■■■□□ 2.27
TNFRSF4-201ENST00000379236 TOMM22Q9NS69 142 aa29.25■■■□□ 2.27
TNFRSF4-201ENST00000379236 FLRT1Q9NZU1 646 aa29.25■■■□□ 2.27
TNFRSF4-201ENST00000379236 ADAMTS5Q9UNA0 930 aa29.25■■■□□ 2.27
TNFRSF4-201ENST00000379236 FOXP2O15409 715 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 CNGA1P29973 690 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 STAT3P40763 770 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 ABRAQ8N0Z2 381 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 OSBPL3Q9H4L5 887 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 OGDHLQ9ULD0 1010 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 ALPK3Q96L96 1907 aa29.24■■■□□ 2.27
TNFRSF4-201ENST00000379236 CCDC171Q6TFL3 1326 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 H0YGN5 161 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 RANBP6O60518 1105 aaKnown RBP29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 ALX1Q15699 326 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 RIOX2Q8IUF8 465 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 PRPF38AQ8NAV1 312 aaKnown RBP29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 GMCL1P1Q8NEA9 526 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 DIS3LQ8TF46 1054 aaKnown RBP29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 MMP19Q99542 508 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 NBPF3Q9H094 633 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 DIAPH3Q9NSV4 1193 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 STX8Q9UNK0 236 aa29.23■■■□□ 2.27
TNFRSF4-201ENST00000379236 EVI5O60447 810 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 CYP2C19P33261 490 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 IRX6P78412 446 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 KCTD2Q14681 263 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 SLFN13Q68D06 897 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 KIFC2Q96AC6 838 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 ANAPC4Q9UJX5 808 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 FEM1BQ9UK73 627 aa29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.22■■■□□ 2.27
TNFRSF4-201ENST00000379236 ZBED4O75132 1171 aa29.21■■■□□ 2.27
TNFRSF4-201ENST00000379236 SDSP20132 328 aa29.21■■■□□ 2.27
TNFRSF4-201ENST00000379236 OLFML2BQ68BL8 750 aa29.21■■■□□ 2.27
TNFRSF4-201ENST00000379236 C11orf49Q9H6J7 331 aa29.21■■■□□ 2.27
TNFRSF4-201ENST00000379236 CEP290O15078 2479 aa29.21■■■□□ 2.27
TNFRSF4-201ENST00000379236 HIP1O00291 1037 aa29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 MSCO60682 206 aa29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 HSPD1P10809 573 aaKnown RBP29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 BMP3P12645 472 aa29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 SLC4A3P48751 1232 aa29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 IKQ13123 557 aaPredicted RBP29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 TEX13BQ9BXU2 312 aa29.2■■■□□ 2.26
TNFRSF4-201ENST00000379236 ZNF214Q9UL59 606 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms