RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 HAND2P61296 217 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 UBXN2AP68543 259 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 CCL14Q16627 93 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
RAB4B-202ENST00000378307 TRIB2Q92519 343 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 SPATC1LQ9H0A9 340 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 ADAMTS5Q9UNA0 930 aa18.28■□□□□ 0.52
RAB4B-202ENST00000378307 TMEM132BQ14DG7 1078 aa18.27■□□□□ 0.52
RAB4B-202ENST00000378307 WDR78Q5VTH9 848 aa18.27■□□□□ 0.52
RAB4B-202ENST00000378307 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
RAB4B-202ENST00000378307 ZNFX1Q9P2E3 1918 aaKnown RBP18.26■□□□□ 0.51
RAB4B-202ENST00000378307 TTLL1O95922 423 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 GJB1P08034 283 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 PTPREP23469 700 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 CCNA1P78396 465 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 REPS2Q8NFH8 660 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 DIAPH3Q9NSV4 1193 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
RAB4B-202ENST00000378307 ZMYM6O95789 1325 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 ORC4O43929 436 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 RANBP6O60518 1105 aaKnown RBP18.25■□□□□ 0.51
RAB4B-202ENST00000378307 HMGCRP04035 888 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 ERCC3P19447 782 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 GJA8P48165 433 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 PLS1Q14651 629 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 SOCS4Q8WXH5 440 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 FLRT1Q9NZU1 646 aa18.25■□□□□ 0.51
RAB4B-202ENST00000378307 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 VWA5AO00534 786 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 XRCC5P13010 732 aaKnown RBP18.24■□□□□ 0.51
RAB4B-202ENST00000378307 RGS2P41220 211 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 MAP2K5Q13163 448 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 GRB14Q14449 540 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 RASGRP2Q7LDG7 609 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 MB21D1Q8N884 522 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 NPLOC4Q8TAT6 608 aa18.24■□□□□ 0.51
RAB4B-202ENST00000378307 U2AF1L4Q8WU68 220 aaKnown RBP18.24■□□□□ 0.51
RAB4B-202ENST00000378307 CWC22Q9HCG8 908 aaKnown RBP18.24■□□□□ 0.51
RAB4B-202ENST00000378307 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
RAB4B-202ENST00000378307 SLC15A5A6NIM6 579 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 HIP1O00291 1037 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 SGPL1O95470 568 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 NOVP48745 357 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
RAB4B-202ENST00000378307 MAP3K21Q5TCX8 1036 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
RAB4B-202ENST00000378307 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
RAB4B-202ENST00000378307 LAMA4Q16363 1823 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 COBLO75128 1261 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
RAB4B-202ENST00000378307 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
RAB4B-202ENST00000378307 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 NCAPG2Q86XI2 1143 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 SHCBP1Q8NEM2 672 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 APBA2Q99767 749 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 SLF1Q9BQI6 1058 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 TOMM22Q9NS69 142 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 NEDD4P46934 1319 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
RAB4B-202ENST00000378307 IGHA2P01877 340 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 PRKAR2AP13861 404 aaKnown RBP18.21■□□□□ 0.51
RAB4B-202ENST00000378307 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
RAB4B-202ENST00000378307 ADORA2AP29274 412 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB4B-202ENST00000378307 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 IVNS1ABPQ9Y6Y0 642 aa18.21■□□□□ 0.51
RAB4B-202ENST00000378307 HOXC6P09630 235 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 BMP3P12645 472 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 MCCP23508 829 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 CHMLP26374 656 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 STAT3P40763 770 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 RIOX2Q8IUF8 465 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 PRPF38AQ8NAV1 312 aaKnown RBP18.2■□□□□ 0.5
RAB4B-202ENST00000378307 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 MROH8Q9H579 483 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 HMX1Q9NP08 348 aaPredicted RBP18.2■□□□□ 0.5
RAB4B-202ENST00000378307 RIPK3Q9Y572 518 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 ZNF236Q9UL36 1845 aa18.2■□□□□ 0.5
RAB4B-202ENST00000378307 ZNF213O14771 459 aa18.19■□□□□ 0.5
RAB4B-202ENST00000378307 STRNO43815 780 aa18.19■□□□□ 0.5
RAB4B-202ENST00000378307 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
RAB4B-202ENST00000378307 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
RAB4B-202ENST00000378307 KIFC2Q96AC6 838 aa18.19■□□□□ 0.5
RAB4B-202ENST00000378307 TCP11L1Q9NUJ3 509 aa18.19■□□□□ 0.5
RAB4B-202ENST00000378307 TMEM232C9JQI7 657 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 TFRCP02786 760 aaKnown RBP18.18■□□□□ 0.5
RAB4B-202ENST00000378307 CYP2C19P33261 490 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms