RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 BACH1O14867 736 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 NMT2O60551 498 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 PRIMPOLQ96LW4 560 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 CSRNP2Q9H175 543 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 MYO6Q9UM54 1294 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 PAXBP1Q9Y5B6 917 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 SLC16A2P36021 539 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
TCOF1-202ENST00000377797 PIGSQ96S52 555 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 NRXN3Q9Y4C0 1643 aa16.29■□□□□ 0.2
TCOF1-202ENST00000377797 CDC27P30260 824 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TRAPPC10P48553 1259 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 HERC4Q5GLZ8 1057 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-202ENST00000377797 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 KRT13P13646 458 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 ZBED4O75132 1171 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-202ENST00000377797 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-202ENST00000377797 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 B4DLN1 442 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 CCDC175P0C221 793 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TMEM87AQ8NBN3 555 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-202ENST00000377797 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
TCOF1-202ENST00000377797 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 SLC4A9Q96Q91 983 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 CRKP46108 304 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 NT5C2P49902 561 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 XPO4Q9C0E2 1151 aaKnown RBP16.27■□□□□ 0.2
TCOF1-202ENST00000377797 DNM3Q9UQ16 869 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.2
TCOF1-202ENST00000377797 A0A087WWV3 80 aa16.27■□□□□ 0.19
TCOF1-202ENST00000377797 NOP2P46087 812 aaKnown RBP16.27■□□□□ 0.19
TCOF1-202ENST00000377797 ARID5AQ03989 594 aa16.27■□□□□ 0.19
TCOF1-202ENST00000377797 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.19
TCOF1-202ENST00000377797 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.19
TCOF1-202ENST00000377797 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 SSR1P43307 286 aaKnown RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 CNGA4Q8IV77 575 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 NOC4LQ9BVI4 516 aaKnown RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 PAFAH1B1P43034 410 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 COA7Q96BR5 231 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 BAG1Q99933 345 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 TNS2Q63HR2 1409 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 PRR16Q569H4 304 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 CCDC42Q96M95 316 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 ALS2CR12Q96Q35 445 aa16.26■□□□□ 0.19
TCOF1-202ENST00000377797 RRAGDQ9NQL2 400 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-202ENST00000377797 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 CLEC17AQ6ZS10 378 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 NEK11Q8NG66 645 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 ZNF408Q9H9D4 720 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 RPL13P26373 211 aaKnown RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 TDRD3Q9H7E2 651 aaKnown RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 ECE2O60344 883 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 LONP1P36776 959 aaKnown RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 AOC3Q16853 763 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 PPP1R9BQ96SB3 815 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 ALAS1P13196 640 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 C17orf53Q8N3J3 647 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-202ENST00000377797 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 TAB2Q9NYJ8 693 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 TBC1D7Q9P0N9 293 aa16.25■□□□□ 0.19
TCOF1-202ENST00000377797 CHRNA5P30532 468 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
TCOF1-202ENST00000377797 CPVLQ9H3G5 476 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-202ENST00000377797 SKIDA1Q1XH10 827 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 NT5C3AQ9H0P0 336 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
TCOF1-202ENST00000377797 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-202ENST00000377797 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms