RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 LRRC7Q96NW7 1537 aa20.77■□□□□ 0.92
CNTNAP3B-203ENST00000377561 H7C1W4 665 aa20.77■□□□□ 0.92
CNTNAP3B-203ENST00000377561 LINC00301Q8NCQ3 95 aa20.77■□□□□ 0.92
CNTNAP3B-203ENST00000377561 AFAP1L1Q8TED9 768 aa20.77■□□□□ 0.92
CNTNAP3B-203ENST00000377561 CCDC169A6NNP5 214 aa20.77■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CCDC6Q16204 474 aa20.77■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.91
CNTNAP3B-203ENST00000377561 FAM207AQ9NSI2 230 aaPredicted RBP20.77■□□□□ 0.91
CNTNAP3B-203ENST00000377561 DNM2P50570 870 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PYCARDQ9ULZ3 195 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ZNF804BA4D1E1 1349 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SPOPO43791 374 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CCDC121Q6ZUS5 278 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MYCT1Q8N699 235 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GPR161Q8N6U8 529 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 IFIH1Q9BYX4 1025 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 USP21Q9UK80 565 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 DKC1O60832 514 aaKnown RBP eCLIP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 KRT5P13647 590 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RESTQ13127 1097 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 BIRC3Q13489 604 aa20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GPKOWQ92917 476 aaPredicted RBP eCLIP20.76■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ERVV-1B6SEH8 477 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 FLOT1O75955 427 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 POLD1P28340 1107 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RRAGAQ7L523 313 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CCDC25Q86WR0 208 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TECP42680 631 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RAD51AP2Q09MP3 1159 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CPLX4Q7Z7G2 160 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RPGRIP1Q96KN7 1286 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MRPL44Q9H9J2 332 aaKnown RBP20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TRAPPC10P48553 1259 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MCTP2Q6DN12 878 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 IKBKBO14920 756 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GCNT3O95395 438 aa20.75■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SMIM23A6NLE4 172 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RPN1P04843 607 aaKnown RBP20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ERCC3P19447 782 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TYW1BQ6NUM6 668 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GSDMAQ96QA5 445 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 BTDP43251 543 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PI16Q6UXB8 463 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MYOCDQ8IZQ8 938 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 DESI2Q9BSY9 194 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CSRNP2Q9H175 543 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CFBP00751 764 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 WHAMMP3Q1A5X7 153 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 USPL1Q5W0Q7 1092 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ZBTB16Q05516 673 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 C2CD5Q86YS7 1000 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 KIAA1524Q8TCG1 905 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SMC6Q96SB8 1091 aa20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 DDX23Q9BUQ8 820 aaKnown RBP20.74■□□□□ 0.91
CNTNAP3B-203ENST00000377561 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 RNASE9P60153 205 aaKnown RBP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CFAP221Q4G0U5 840 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 C11orf57Q6ZUT1 292 aaPredicted RBP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 C10orf67Q8IYJ2 551 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 IFT74Q96LB3 600 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SAR1BQ9Y6B6 198 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ACTN4O43707 911 aaKnown RBP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ERCC5P28715 1186 aaPredicted RBP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 UBL4BQ8N7F7 174 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PSTPIP2Q9H939 334 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TXNDC16Q9P2K2 825 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 EXOC3O60645 756 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 DPCR1Q3MIW9 517 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 CCDC114Q96M63 670 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 STX10O60499 249 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 NRBP1Q9UHY1 535 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 GOLGA8HP0CJ92 632 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 UIMC1Q96RL1 719 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 FTOQ9C0B1 505 aaKnown RBP eCLIP20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 STK32BQ9NY57 414 aa20.73■□□□□ 0.91
CNTNAP3B-203ENST00000377561 TSC1Q92574 1164 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ZNF215Q9UL58 517 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 UTP11Q9Y3A2 253 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 ATP2A2P16615 1042 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 IFNAR1P17181 557 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MICALL1Q8N3F8 863 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 NLRC4Q9NPP4 1024 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PICK1Q9NRD5 415 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 BRD3Q15059 726 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 SYCE1Q8N0S2 351 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 PCDHA12Q9UN75 941 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 LMTK2Q8IWU2 1503 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 LARGE2Q8N3Y3 721 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 MAGEF1Q9HAY2 307 aa20.72■□□□□ 0.91
CNTNAP3B-203ENST00000377561 FRMPD2Q68DX3 1309 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms