RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 EPHX2P34913 555 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 SCRN1Q12765 414 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 NFIAQ12857 509 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 ASPRV1Q53RT3 343 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 TDRD12Q587J7 1177 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 DRC1Q96MC2 740 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 FGFR1OPO95684 399 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 TECP42680 631 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 SYDE2Q5VT97 1194 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PYM1Q9BRP8 204 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 NEMFO60524 1076 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 N4BP3O15049 544 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 PLCD1P51178 756 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 SV2BQ7L1I2 683 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 OSBPL5Q9H0X9 879 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 CBFA2T2O43439 604 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 DDAH1O94760 285 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 DNA2P51530 1060 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 MTMR2Q13614 643 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 UBE2SQ16763 222 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 HAUS3Q68CZ6 603 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 UPF1Q92900 1129 aaKnown RBP eCLIP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 TRIM6Q9C030 488 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 GJB4Q9NTQ9 266 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 PSMA7O14818 248 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 CHAMP1Q96JM3 812 aa9.54□□□□□ -0.88
CRNKL1-202ENST00000377340 PLEKHA8P1O95397 391 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 CCDC181Q5TID7 509 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 SNRNP48Q6IEG0 339 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 ERCC4Q92889 916 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 ZMYM6O95789 1325 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 PFKFB2O60825 505 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 CSPG5O95196 566 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 KRT13P13646 458 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 TNNT1P13805 278 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 CAGE1Q8TC20 777 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 DNM3Q9UQ16 869 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NEDD4P46934 1319 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NR5A1Q13285 461 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NECTIN1Q15223 517 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 HOXC10Q9NYD6 342 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 FLT1P17948 1338 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 EP400NLQ6ZTU2 488 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NEK8Q86SG6 692 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 DGKHQ86XP1 1220 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 AGBL3Q8NEM8 1001 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 IFT74Q96LB3 600 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 ADD3Q9UEY8 706 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 ADAMTSL3P82987 1691 aa9.53□□□□□ -0.88
CRNKL1-202ENST00000377340 NOSTRINQ8IVI9 506 aa9.52□□□□□ -0.88
CRNKL1-202ENST00000377340 CAMKK2Q96RR4 588 aa9.52□□□□□ -0.88
CRNKL1-202ENST00000377340 GLIS2Q9BZE0 524 aaPredicted RBP9.52□□□□□ -0.88
CRNKL1-202ENST00000377340 RMND1Q9NWS8 449 aa9.52□□□□□ -0.88
CRNKL1-202ENST00000377340 HERC5Q9UII4 1024 aaKnown RBP9.52□□□□□ -0.88
CRNKL1-202ENST00000377340 SH2B2O14492 632 aaPredicted RBP9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 CDC25AP30304 524 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 DNM2P50570 870 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 ARID5AQ03989 594 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 CCDC70Q6NSX1 233 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 HHIPL2Q6UWX4 724 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 CYB5R4Q7L1T6 521 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 ENAHQ8N8S7 591 aaPredicted RBP9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 ZNF397Q8NF99 534 aaPredicted RBP9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 AP5M1Q9H0R1 490 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 DNAJC25Q9H1X3 360 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 LUC7LQ9NQ29 371 aaKnown RBP9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 FZD1Q9UP38 647 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L15C9J2P7 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L11C9JVI0 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L18D6R9N7 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L22D6RA61 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L19D6RCP7 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L20D6RJB6 530 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 SMTNP53814 917 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms