RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ACRBPQ8NEB7 543 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 GSDMAQ96QA5 445 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 DUOX1Q9NRD9 1551 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 MYH13Q9UKX3 1938 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 TRIM49BA6NDI0 452 aa18.39■□□□□ 0.54
TRIM27-202ENST00000377199 TADA3O75528 432 aa18.39■□□□□ 0.54
TRIM27-202ENST00000377199 APTXQ7Z2E3 356 aaKnown RBP18.39■□□□□ 0.54
TRIM27-202ENST00000377199 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.54
TRIM27-202ENST00000377199 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.54
TRIM27-202ENST00000377199 BCORQ6W2J9 1755 aa18.39■□□□□ 0.54
TRIM27-202ENST00000377199 POLR3GO15318 223 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-202ENST00000377199 ABL1P00519 1130 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 STAT6P42226 847 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 GRIK5Q16478 980 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 SH3RF3Q8TEJ3 882 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-202ENST00000377199 TGFBRAP1Q8WUH2 860 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 PFKFB3Q16875 520 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-202ENST00000377199 INF2Q27J81 1249 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 NELFBQ8WX92 580 aa18.39■□□□□ 0.53
TRIM27-202ENST00000377199 ARGLU1Q9NWB6 273 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-202ENST00000377199 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 KRT31Q15323 416 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 UTP14CQ5TAP6 766 aaKnown RBP18.38■□□□□ 0.53
TRIM27-202ENST00000377199 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 CACNA1SQ13698 1873 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 CCDC194A0A1B0GVG4 234 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 ZNF569Q5MCW4 686 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 BLIDQ8IZY5 108 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
TRIM27-202ENST00000377199 RNF225M0QZC1 329 aaPredicted RBP18.37■□□□□ 0.53
TRIM27-202ENST00000377199 BMP15O95972 392 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 GYPCP04921 128 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 BMS1Q14692 1282 aaKnown RBP18.37■□□□□ 0.53
TRIM27-202ENST00000377199 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
TRIM27-202ENST00000377199 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 TUBB4AP04350 444 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 PNMA6AP0CW24 399 aaPredicted RBP18.37■□□□□ 0.53
TRIM27-202ENST00000377199 KIF5BP33176 963 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 FHOD1Q9Y613 1164 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
TRIM27-202ENST00000377199 PAK1Q13153 545 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 THRAP3Q9Y2W1 955 aaKnown RBP18.36■□□□□ 0.53
TRIM27-202ENST00000377199 EFCAB8A8MWE9 144 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 ORC4O43929 436 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 MFAP3LO75121 409 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
TRIM27-202ENST00000377199 TPM1P09493 284 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 TXLNAP40222 546 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 COL16A1Q07092 1604 aaPredicted RBP18.36■□□□□ 0.53
TRIM27-202ENST00000377199 NFIXQ14938 502 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 E2F4Q16254 413 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 CDKAL1Q5VV42 579 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 TMEM60Q9H2L4 133 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 ADGRG1Q9Y653 693 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 GOLGA6L9A6NEM1 432 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 RPN1P04843 607 aaKnown RBP18.36■□□□□ 0.53
TRIM27-202ENST00000377199 PRCPP42785 496 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 PDXDC2PQ6P474 469 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 KIFC2Q96AC6 838 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 MRFAP1Q9Y605 127 aa18.36■□□□□ 0.53
TRIM27-202ENST00000377199 EP400Q96L91 3159 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 MAP3K9P80192 1104 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 UBXN1Q04323 297 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 CTAGE1Q96RT6 745 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 KIF5CO60282 957 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 FGRP09769 529 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 KCNJ12Q14500 433 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 GPIHBP1Q8IV16 184 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
TRIM27-202ENST00000377199 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
TRIM27-202ENST00000377199 SRRTQ9BXP5 876 aaKnown RBP18.35■□□□□ 0.53
TRIM27-202ENST00000377199 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 TFR2Q9UP52 801 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 UBA7P41226 1012 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 TERF2Q15554 542 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 WWC2Q6AWC2 1192 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 DTHD1Q6ZMT9 781 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 PANX2Q96RD6 677 aa18.34■□□□□ 0.53
TRIM27-202ENST00000377199 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
TRIM27-202ENST00000377199 COPB1P53618 953 aaKnown RBP18.33■□□□□ 0.53
TRIM27-202ENST00000377199 PMS1P54277 932 aaKnown RBP18.33■□□□□ 0.53
TRIM27-202ENST00000377199 ANKRD2Q9GZV1 360 aa18.33■□□□□ 0.53
TRIM27-202ENST00000377199 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
TRIM27-202ENST00000377199 PCP11498 1178 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms