RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 PARP3Q9Y6F1 533 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 H3BQF6 201 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 SRLQ86TD4 932 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 IL17RBQ9NRM6 502 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 ADAM21Q9UKJ8 722 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 CEP131Q9UPN4 1083 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 EFCAB8A8MWE9 144 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 CCP110O43303 1012 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 GRAPQ13588 217 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 HSP90AA4PQ58FG1 418 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 NT5DC1Q5TFE4 455 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
TRIM27-201ENST00000377194 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
TRIM27-201ENST00000377194 GRAPLQ8TC17 118 aaPredicted RBP19.45■□□□□ 0.7
TRIM27-201ENST00000377194 DLEC1Q9Y238 1755 aa19.44■□□□□ 0.7
TRIM27-201ENST00000377194 ZNF174Q15697 407 aa19.44■□□□□ 0.7
TRIM27-201ENST00000377194 SH3RF3Q8TEJ3 882 aaPredicted RBP19.44■□□□□ 0.7
TRIM27-201ENST00000377194 SRRTQ9BXP5 876 aaKnown RBP19.44■□□□□ 0.7
TRIM27-201ENST00000377194 NHSQ6T4R5 1651 aa19.44■□□□□ 0.7
TRIM27-201ENST00000377194 UBASH3AP57075 661 aa19.44■□□□□ 0.7
TRIM27-201ENST00000377194 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.77e-8■■■■□ 20.6
TRIM27-201ENST00000377194 DHX8Q14562 1220 aaKnown RBP19.44■□□□□ 0.7
TRIM27-201ENST00000377194 C12orf60Q5U649 245 aa19.44■□□□□ 0.7
TRIM27-201ENST00000377194 CWC15Q9P013 229 aaKnown RBP19.44■□□□□ 0.7
TRIM27-201ENST00000377194 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 KIAA1551Q9HCM1 1747 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
TRIM27-201ENST00000377194 GTF2A1P52655 376 aaPredicted RBP19.43■□□□□ 0.7
TRIM27-201ENST00000377194 TFAP4Q01664 338 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 CNBD1Q8NA66 436 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 MED15Q96RN5 788 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 ZSWIM4Q9H7M6 989 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 SERPINC1P01008 464 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
TRIM27-201ENST00000377194 FOXR1Q6PIV2 292 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
TRIM27-201ENST00000377194 GOLGA5Q8TBA6 731 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 DHX58Q96C10 678 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 PARD6BQ9BYG5 372 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 ARFGAP3Q9NP61 516 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 TMEM232C9JQI7 657 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 ANKRD65E5RJM6 399 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 CASP1P29466 404 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 MORC3Q14149 939 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 PRR5LQ6MZQ0 368 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 WDR66Q8TBY9 1149 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 WDR24Q96S15 920 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 HOOK1Q9UJC3 728 aaKnown RBP19.42■□□□□ 0.7
TRIM27-201ENST00000377194 LEMD3Q9Y2U8 911 aa19.42■□□□□ 0.7
TRIM27-201ENST00000377194 VWA3AA6NCI4 1184 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 SCG2P13521 617 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 USP5P45974 858 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 CFAP100Q494V2 611 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 STAG2Q8N3U4 1231 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 SPATA20Q8TB22 786 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 SYMPKQ92797 1274 aaKnown RBP19.41■□□□□ 0.7
TRIM27-201ENST00000377194 FUT8Q9BYC5 575 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 INTS13Q9NVM9 706 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.41■□□□□ 0.7
TRIM27-201ENST00000377194 ATP8B1O43520 1251 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 TPM1P09493 284 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 TRMT44Q8IYL2 757 aaKnown RBP19.41■□□□□ 0.7
TRIM27-201ENST00000377194 SLC44A5Q8NCS7 719 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 GJD4Q96KN9 370 aaPredicted RBP19.41■□□□□ 0.7
TRIM27-201ENST00000377194 LAMB1P07942 1786 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 XDHP47989 1333 aa19.41■□□□□ 0.7
TRIM27-201ENST00000377194 USP17L3A6NCW0 530 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 USP17L4A6NCW7 530 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 PLCD1P51178 756 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 PTGDRQ13258 359 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
TRIM27-201ENST00000377194 PIK3AP1Q6ZUJ8 805 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 USP17L1Q7RTZ2 530 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 TGFBRAP1Q8WUH2 860 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 AFMP43652 599 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 GPSM2P81274 684 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 TTC38Q5R3I4 469 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 BRMS1Q9HCU9 246 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 VPS18Q9P253 973 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 LY75O60449 1722 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
TRIM27-201ENST00000377194 NLRP5P59047 1200 aa19.39■□□□□ 0.7
TRIM27-201ENST00000377194 GNG11P61952 73 aa19.39■□□□□ 0.7
TRIM27-201ENST00000377194 PPP2R3AQ06190 1150 aa19.39■□□□□ 0.7
TRIM27-201ENST00000377194 MLKLQ8NB16 471 aa19.39■□□□□ 0.69
TRIM27-201ENST00000377194 PPP2R2CQ9Y2T4 447 aa19.39■□□□□ 0.69
TRIM27-201ENST00000377194 NFE2L3Q9Y4A8 694 aa19.39■□□□□ 0.69
TRIM27-201ENST00000377194 MAST2Q6P0Q8 1798 aa19.39■□□□□ 0.69
TRIM27-201ENST00000377194 ACTN2P35609 894 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 MCM6Q14566 821 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 SLC35G1Q2M3R5 365 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 PNMA1Q8ND90 353 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 KAT14Q9H8E8 782 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 ZSCAN12O43309 604 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
TRIM27-201ENST00000377194 IL17AQ16552 155 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 KANK3Q6NY19 840 aa19.38■□□□□ 0.69
TRIM27-201ENST00000377194 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
TRIM27-201ENST00000377194 DGKHQ86XP1 1220 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms