RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 CTC1Q2NKJ3 1217 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 BEND3Q5T5X7 828 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
SSX1-201ENST00000376919 ATF7IPQ6VMQ6 1270 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 LYSMD3Q7Z3D4 306 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 PRICKLE2Q7Z3G6 844 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 TIAM2Q8IVF5 1701 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 ITPRIPQ8IWB1 547 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 HDAC5Q9UQL6 1122 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 COL4A3BPQ9Y5P4 624 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 CHD4Q14839 1912 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 CDHR2Q9BYE9 1310 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 SLX4Q8IY92 1834 aa6.97□□□□□ -1.29
SSX1-201ENST00000376919 TAF1P21675 1872 aa6.96□□□□□ -1.29
SSX1-201ENST00000376919 PHACTR2O75167 634 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 TRIM27P14373 513 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 YBX3P16989 372 aaKnown RBP eCLIP6.96□□□□□ -1.31e-7■■□□□ 13.8
SSX1-201ENST00000376919 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 CCDC93Q567U6 631 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 NXPE4Q6UWF7 544 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 SYNE4Q8N205 404 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 AIDAQ96BJ3 306 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 SRPK1Q96SB4 655 aaKnown RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 CDC5LQ99459 802 aaKnown RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 TRIM55Q9BYV6 548 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 NPHS2Q9NP85 383 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 KLHL42Q9P2K6 505 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 FNDC3AQ9Y2H6 1198 aaKnown RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
SSX1-201ENST00000376919 ABCC4O15439 1325 aa6.96□□□□□ -1.3
SSX1-201ENST00000376919 UTRNP46939 3433 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
SSX1-201ENST00000376919 GFRA3O60609 400 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 BMP1P13497 986 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
SSX1-201ENST00000376919 GRAPQ13588 217 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 CCDC57Q2TAC2 916 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 CRY2Q49AN0 593 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 CCDC181Q5TID7 509 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 IER5Q5VY09 327 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 ZNF438Q7Z4V0 828 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 ANKRD18AQ8IVF6 992 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 GRAPLQ8TC17 118 aaPredicted RBP6.95□□□□□ -1.3
SSX1-201ENST00000376919 RHPN1Q8TCX5 695 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 ARHGAP45Q92619 1136 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 TMX1Q9H3N1 280 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 TTF2Q9UNY4 1162 aaKnown RBP6.95□□□□□ -1.3
SSX1-201ENST00000376919 CCDC88AQ3V6T2 1871 aa6.95□□□□□ -1.3
SSX1-201ENST00000376919 LRRC37AA6NMS7 1700 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 ANKRD18BA2A2Z9 1011 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 H7C1W4 665 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 DNAJC6O75061 913 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 GNAI3P08754 354 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 KCNA3P22001 575 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 GSTT1P30711 240 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 KCNJ4P48050 445 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 RASSF7Q02833 373 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 IFIT5Q13325 482 aaKnown RBP6.94□□□□□ -1.3
SSX1-201ENST00000376919 PLEKHG4Q58EX7 1191 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 SLC10A5Q5PT55 438 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 ANKS3Q6ZW76 656 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 FILIP1Q7Z7B0 1213 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 CRIPAKQ8N1N5 446 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 TMEM57Q8N5G2 664 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
SSX1-201ENST00000376919 CRAMP1Q96RY5 1269 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 TAOK3Q9H2K8 898 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 SUV39H2Q9H5I1 410 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 PCDH12Q9NPG4 1184 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 PRKAB1Q9Y478 270 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 FER1L6Q2WGJ9 1857 aa6.94□□□□□ -1.3
SSX1-201ENST00000376919 A0A1B0GTH6 734 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 AXIN1O15169 862 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 PLIN1O60240 522 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 NBPF7P0C2Y1 421 aaPredicted RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 RHOQP17081 205 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ATP4AP20648 1035 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ITGA6P23229 1130 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ARSDP51689 593 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 COL9A2Q14055 689 aaPredicted RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 RAB33AQ14088 237 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 SF3B3Q15393 1217 aaKnown RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 LMBR1LQ6UX01 489 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 RTKN2Q8IZC4 609 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 SUPT20HQ8NEM7 779 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 PANK1Q8TE04 598 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 SUCLG2Q96I99 432 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms