RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLC25A27O95847 323 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 TMEM132BQ14DG7 1078 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 FAM83BQ5T0W9 1011 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 ABRAQ8N0Z2 381 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 PI4K2BQ8TCG2 481 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 OTUD7AQ8TE49 926 aaPredicted RBP25.14■■□□□ 1.62
VSX1-201ENST00000376707 ZNF287Q9HBT7 754 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 COBLO75128 1261 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 FCER1AP12319 257 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 SYN1P17600 705 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 YTHDC1Q96MU7 727 aaKnown RBP25.13■■□□□ 1.61
VSX1-201ENST00000376707 CRBNQ96SW2 442 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 FSD1Q9BTV5 496 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ZBTB47Q9UFB7 747 aaPredicted RBP25.13■■□□□ 1.61
VSX1-201ENST00000376707 PPP1R9AQ9ULJ8 1098 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ADAMTS5Q9UNA0 930 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ZNF236Q9UL36 1845 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 PATL2C9JE40 543 aaKnown RBP25.12■■□□□ 1.61
VSX1-201ENST00000376707 IGHA2P01877 340 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 CYBAP13498 195 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 ZNF444Q8N0Y2 327 aaPredicted RBP25.12■■□□□ 1.61
VSX1-201ENST00000376707 TRPV1Q8NER1 839 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 NACAP1Q9BZK3 213 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 NYAP2Q9P242 653 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 VWA5AO00534 786 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 MX1P20591 662 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 IFNL3Q8IZI9 196 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 GDF15Q99988 308 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 RANBP2P49792 3224 aaKnown RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 PRDM1O75626 825 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 STAT3P40763 770 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 LRRC26Q2I0M4 334 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 RIOX2Q8IUF8 465 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 SEC62Q99442 399 aaKnown RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 MMP19Q99542 508 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 SENP6Q9GZR1 1112 aaPredicted RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 CLIP2Q9UDT6 1046 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 F5H6K3 240 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 BMP8BP34820 402 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 KLRC3Q07444 240 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 KCTD2Q14681 263 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 MAML3Q96JK9 1138 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 NUP88Q99567 741 aaPredicted RBP25.09■■□□□ 1.61
VSX1-201ENST00000376707 SLF1Q9BQI6 1058 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 DNM1LO00429 736 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 NDUFB10O96000 172 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 COPB2P35606 906 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 ZMYM1Q5SVZ6 1142 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 NAPBQ9H115 298 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 ZNF214Q9UL59 606 aaPredicted RBP25.08■■□□□ 1.61
VSX1-201ENST00000376707 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 SEPT4O43236 478 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 SLC3A2P08195 630 aaKnown RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 MAGEA10P43363 369 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 HDAC1Q13547 482 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 ANKRD45Q5TZF3 282 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 ARRDC4Q8NCT1 418 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 GREB1LQ9C091 1923 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 PARP14Q460N5 1801 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 PDE4BQ07343 736 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 AAMPQ13685 434 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 PRAMEF19Q5SWL8 479 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 ANO1Q5XXA6 986 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 REPS2Q8NFH8 660 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 CEP95Q96GE4 821 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 SALL3Q9BXA9 1300 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 FRMPD3Q5JV73 1810 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 PGK2P07205 417 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 GJC2Q5T442 439 aaPredicted RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 PRPF38AQ8NAV1 312 aaKnown RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 TEX13BQ9BXU2 312 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 MTMR4Q9NYA4 1195 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 CTDP1Q9Y5B0 961 aaPredicted RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 KBTBD13C9JR72 458 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 TTLL1O95922 423 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 MYCNP04198 464 aaPredicted RBP25.04■■□□□ 1.6
VSX1-201ENST00000376707 TSPY3P0CV98 308 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 TSPY8P0CW00 308 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 ATN1P54259 1190 aaPredicted RBP25.04■■□□□ 1.6
VSX1-201ENST00000376707 PPARAQ07869 468 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 MKL1Q969V6 931 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 SYNPO2Q9UMS6 1093 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 SNRNP48Q6IEG0 339 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 LRRC47Q8N1G4 583 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 DIS3Q9Y2L1 958 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 SOX1O00570 391 aaPredicted RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 ZBED4O75132 1171 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 ZNF792Q3KQV3 632 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 FAM47AQ5JRC9 791 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 NEDD1Q8NHV4 660 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 KIFC2Q96AC6 838 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 TINF2Q9BSI4 451 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 UBE2OQ9C0C9 1292 aaKnown RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 NRBP1Q9UHY1 535 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 COL11A1P12107 1806 aaPredicted RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 SLC4A3P48751 1232 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 TFAP4Q01664 338 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 CCDC129Q6ZRS4 1044 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 CPXCR1Q8N123 301 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 GMCL1P1Q8NEA9 526 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms