RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLC25A27O95847 323 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 TMEM132BQ14DG7 1078 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 FAM83BQ5T0W9 1011 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 ABRAQ8N0Z2 381 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 PI4K2BQ8TCG2 481 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 OTUD7AQ8TE49 926 aaPredicted RBP25.14■■□□□ 1.62
VSX1-201ENST00000376707 ZNF287Q9HBT7 754 aa25.14■■□□□ 1.62
VSX1-201ENST00000376707 COBLO75128 1261 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 FCER1AP12319 257 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 SYN1P17600 705 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 YTHDC1Q96MU7 727 aaKnown RBP25.13■■□□□ 1.61
VSX1-201ENST00000376707 CRBNQ96SW2 442 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 FSD1Q9BTV5 496 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ZBTB47Q9UFB7 747 aaPredicted RBP25.13■■□□□ 1.61
VSX1-201ENST00000376707 PPP1R9AQ9ULJ8 1098 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ADAMTS5Q9UNA0 930 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 ZNF236Q9UL36 1845 aa25.13■■□□□ 1.61
VSX1-201ENST00000376707 PATL2C9JE40 543 aaKnown RBP25.12■■□□□ 1.61
VSX1-201ENST00000376707 IGHA2P01877 340 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 CYBAP13498 195 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 ZNF444Q8N0Y2 327 aaPredicted RBP25.12■■□□□ 1.61
VSX1-201ENST00000376707 TRPV1Q8NER1 839 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 NACAP1Q9BZK3 213 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 NYAP2Q9P242 653 aa25.12■■□□□ 1.61
VSX1-201ENST00000376707 VWA5AO00534 786 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 MX1P20591 662 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 IFNL3Q8IZI9 196 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 GDF15Q99988 308 aa25.11■■□□□ 1.61
VSX1-201ENST00000376707 RANBP2P49792 3224 aaKnown RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 PRDM1O75626 825 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 STAT3P40763 770 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 LRRC26Q2I0M4 334 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 RIOX2Q8IUF8 465 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 SEC62Q99442 399 aaKnown RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 MMP19Q99542 508 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 SENP6Q9GZR1 1112 aaPredicted RBP25.1■■□□□ 1.61
VSX1-201ENST00000376707 CLIP2Q9UDT6 1046 aa25.1■■□□□ 1.61
VSX1-201ENST00000376707 F5H6K3 240 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 BMP8BP34820 402 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 KLRC3Q07444 240 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 KCTD2Q14681 263 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 MAML3Q96JK9 1138 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 NUP88Q99567 741 aaPredicted RBP25.09■■□□□ 1.61
VSX1-201ENST00000376707 SLF1Q9BQI6 1058 aa25.09■■□□□ 1.61
VSX1-201ENST00000376707 DNM1LO00429 736 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 NDUFB10O96000 172 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 COPB2P35606 906 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 ZMYM1Q5SVZ6 1142 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 NAPBQ9H115 298 aa25.08■■□□□ 1.61
VSX1-201ENST00000376707 ZNF214Q9UL59 606 aaPredicted RBP25.08■■□□□ 1.61
VSX1-201ENST00000376707 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 SEPT4O43236 478 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 SLC3A2P08195 630 aaKnown RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 MAGEA10P43363 369 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 HDAC1Q13547 482 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 ANKRD45Q5TZF3 282 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 ARRDC4Q8NCT1 418 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 GREB1LQ9C091 1923 aaPredicted RBP25.07■■□□□ 1.6
VSX1-201ENST00000376707 PARP14Q460N5 1801 aa25.07■■□□□ 1.6
VSX1-201ENST00000376707 PDE4BQ07343 736 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 AAMPQ13685 434 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 PRAMEF19Q5SWL8 479 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 ANO1Q5XXA6 986 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 REPS2Q8NFH8 660 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 CEP95Q96GE4 821 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 SALL3Q9BXA9 1300 aa25.06■■□□□ 1.6
VSX1-201ENST00000376707 FRMPD3Q5JV73 1810 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 PGK2P07205 417 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 GJC2Q5T442 439 aaPredicted RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 PRPF38AQ8NAV1 312 aaKnown RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 TEX13BQ9BXU2 312 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 MTMR4Q9NYA4 1195 aa25.05■■□□□ 1.6
VSX1-201ENST00000376707 CTDP1Q9Y5B0 961 aaPredicted RBP25.05■■□□□ 1.6
VSX1-201ENST00000376707 KBTBD13C9JR72 458 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 TTLL1O95922 423 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 MYCNP04198 464 aaPredicted RBP25.04■■□□□ 1.6
VSX1-201ENST00000376707 TSPY3P0CV98 308 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 TSPY8P0CW00 308 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 ATN1P54259 1190 aaPredicted RBP25.04■■□□□ 1.6
VSX1-201ENST00000376707 PPARAQ07869 468 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 MKL1Q969V6 931 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 SYNPO2Q9UMS6 1093 aa25.04■■□□□ 1.6
VSX1-201ENST00000376707 SNRNP48Q6IEG0 339 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 LRRC47Q8N1G4 583 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 DIS3Q9Y2L1 958 aaKnown RBP25.03■■□□□ 1.6
VSX1-201ENST00000376707 SOX1O00570 391 aaPredicted RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 ZBED4O75132 1171 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 ZNF792Q3KQV3 632 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 FAM47AQ5JRC9 791 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 NEDD1Q8NHV4 660 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 KIFC2Q96AC6 838 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 TINF2Q9BSI4 451 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 UBE2OQ9C0C9 1292 aaKnown RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 NRBP1Q9UHY1 535 aa25.02■■□□□ 1.6
VSX1-201ENST00000376707 COL11A1P12107 1806 aaPredicted RBP25.02■■□□□ 1.6
VSX1-201ENST00000376707 SLC4A3P48751 1232 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 TFAP4Q01664 338 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 CCDC129Q6ZRS4 1044 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 CPXCR1Q8N123 301 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 GMCL1P1Q8NEA9 526 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms