RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 FLOT1O75955 427 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
SDHB-201ENST00000375499 DSG3P32926 999 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 FAM83BQ5T0W9 1011 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
SDHB-201ENST00000375499 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
SDHB-201ENST00000375499 FGAP02671 866 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 HSPD1P10809 573 aaKnown RBP18.55■□□□□ 0.56
SDHB-201ENST00000375499 ALX1Q15699 326 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 CCL14Q16627 93 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
SDHB-201ENST00000375499 LRRC47Q8N1G4 583 aaKnown RBP18.55■□□□□ 0.56
SDHB-201ENST00000375499 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 NUDT12Q9BQG2 462 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
SDHB-201ENST00000375499 IL25Q9H293 177 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 GOPCQ9HD26 462 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 MTMR4Q9NYA4 1195 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 LAMA4Q16363 1823 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 ZNF236Q9UL36 1845 aa18.55■□□□□ 0.56
SDHB-201ENST00000375499 RAD21O60216 631 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 NDUFB10O96000 172 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 HMGCRP04035 888 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 PDE4BQ07343 736 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 NEDD1Q8NHV4 660 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 NBPF3Q9H094 633 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 SPATC1LQ9H0A9 340 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 ANAPC4Q9UJX5 808 aa18.54■□□□□ 0.56
SDHB-201ENST00000375499 NMT2O60551 498 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 TSPY3P0CV98 308 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 TSPY8P0CW00 308 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 CCNA1P78396 465 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 TFAP4Q01664 338 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 WDR78Q5VTH9 848 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 TICAM2Q86XR7 235 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 PAWRQ96IZ0 340 aaKnown RBP18.53■□□□□ 0.56
SDHB-201ENST00000375499 GDF15Q99988 308 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
SDHB-201ENST00000375499 ZMYM6O95789 1325 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 F5H6K3 240 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 PTPREP23469 700 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 HAND2P61296 217 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 KLRC3Q07444 240 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 GRB14Q14449 540 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 TMEM132BQ14DG7 1078 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
SDHB-201ENST00000375499 RASGRP2Q7LDG7 609 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
SDHB-201ENST00000375499 REPS2Q8NFH8 660 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 FLRT1Q9NZU1 646 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 PPP1R9AQ9ULJ8 1098 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 ADAMTS5Q9UNA0 930 aa18.52■□□□□ 0.56
SDHB-201ENST00000375499 TTLL1O95922 423 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
SDHB-201ENST00000375499 FGRP09769 529 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 XRCC5P13010 732 aaKnown RBP18.51■□□□□ 0.55
SDHB-201ENST00000375499 ERCC3P19447 782 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 MAP2K5Q13163 448 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 LRIT3Q3SXY7 679 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 MAP3K21Q5TCX8 1036 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 TBC1D10CQ8IV04 446 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 NPLOC4Q8TAT6 608 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 MKL1Q969V6 931 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 APBA2Q99767 749 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 FRMPD3Q5JV73 1810 aa18.51■□□□□ 0.55
SDHB-201ENST00000375499 ZNFX1Q9P2E3 1918 aaKnown RBP18.51■□□□□ 0.55
SDHB-201ENST00000375499 RPTORQ8N122 1335 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 SOX1O00570 391 aaPredicted RBP18.5■□□□□ 0.55
SDHB-201ENST00000375499 RGS2P41220 211 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 PLS1Q14651 629 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 MB21D1Q8N884 522 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 LRCH3Q96II8 777 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.5■□□□□ 0.55
SDHB-201ENST00000375499 CWC22Q9HCG8 908 aaKnown RBP18.5■□□□□ 0.55
SDHB-201ENST00000375499 HMX1Q9NP08 348 aaPredicted RBP18.5■□□□□ 0.55
SDHB-201ENST00000375499 DIAPH3Q9NSV4 1193 aa18.5■□□□□ 0.55
SDHB-201ENST00000375499 SLC15A5A6NIM6 579 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 TSPY2A6NKD2 308 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 VWA5AO00534 786 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 ORC4O43929 436 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
SDHB-201ENST00000375499 ZKSCAN1P17029 563 aaPredicted RBP18.49■□□□□ 0.55
SDHB-201ENST00000375499 SHCBP1Q8NEM2 672 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 ZNF214Q9UL59 606 aaPredicted RBP18.49■□□□□ 0.55
SDHB-201ENST00000375499 CUL9Q8IWT3 2517 aa18.49■□□□□ 0.55
SDHB-201ENST00000375499 RANBP6O60518 1105 aaKnown RBP18.48■□□□□ 0.55
SDHB-201ENST00000375499 ADORA2AP29274 412 aa18.48■□□□□ 0.55
SDHB-201ENST00000375499 CACNB2Q08289 660 aaPredicted RBP18.48■□□□□ 0.55
SDHB-201ENST00000375499 RRP12Q5JTH9 1297 aaKnown RBP18.48■□□□□ 0.55
SDHB-201ENST00000375499 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
SDHB-201ENST00000375499 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
SDHB-201ENST00000375499 STXBP5LQ9Y2K9 1186 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms