RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FAM192AQ9GZU8 254 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 PCDHGA3Q9Y5H0 932 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 UBXN8O00124 270 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SMARCA5O60264 1052 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 IFNA14P01570 189 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 PHACTR3Q96KR7 559 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 CRNKL1Q9BZJ0 848 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 APOA4P06727 396 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 GNAT2P19087 354 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 AKAP5P24588 427 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 TMEM259Q4ZIN3 620 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 FGD4Q96M96 766 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 JPH2Q9BR39 696 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 FTOQ9C0B1 505 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 DHX36Q9H2U1 1008 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 PRPF6O94906 941 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ZKSCAN2Q63HK3 967 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 OTULINQ96BN8 352 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 FAF2Q96CS3 445 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 TMEM266Q2M3C6 531 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 MTERF2Q49AM1 385 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 MAP3K20Q9NYL2 800 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 MTMR7Q9Y216 660 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 PARNO95453 639 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 NFYCQ13952 458 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 RCN2Q14257 317 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ZNF574Q6ZN55 896 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 TMC6Q7Z403 805 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SRRM1Q8IYB3 904 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 BBS1Q8NFJ9 593 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 V9GYQ6 96 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SMAPO00193 183 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 POLR2EP19388 210 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 NEK4P51957 841 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 RPL19P84098 196 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 GALNT18Q6P9A2 607 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CCDC103Q8IW40 242 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 GTF3C6Q969F1 213 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ASCC2Q9H1I8 757 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ARL2BPQ9Y2Y0 163 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 DCAF1Q9Y4B6 1507 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 RANBP6O60518 1105 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 GSTA1P08263 222 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 GSTA2P09210 222 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CLUP10909 449 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 LCP1P13796 627 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 MTMR3Q13615 1198 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 TUBB2AQ13885 445 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ZNF699Q32M78 642 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 TUBB2BQ9BVA1 445 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 PCDH18Q9HCL0 1135 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 THAP12O43422 761 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 TIMMDC1Q9NPL8 285 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 HDGFP51858 240 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ARF3P61204 181 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ARF1P84077 181 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 GABPAQ06546 454 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 DCTN2Q13561 401 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SLC12A1Q13621 1099 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 MFN1Q8IWA4 741 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 TTC29Q8NA56 475 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ATP6V1C2Q8NEY4 427 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 FAM81BQ96LP2 452 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SERPINI1Q99574 410 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CCDC28BQ9BUN5 200 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CCSER2Q9H7U1 834 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 RHBDL2Q9NX52 303 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CCDC151A5D8V7 595 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 HSPD1P10809 573 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 VCAM1P19320 739 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 PTPN6P29350 595 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 MAGEA2P43356 314 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SLC30A9Q6PML9 568 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 KIFC2Q96AC6 838 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 MTBPQ96DY7 904 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 USP28Q96RU2 1077 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SLC24A3Q9HC58 644 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 JRKLQ9Y4A0 524 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 IPPQ9Y573 584 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 RPGRIP1LQ68CZ1 1315 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 KANK3Q6NY19 840 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ANO5Q75V66 913 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 NANOGNBQ7Z5D8 188 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SMCR8Q8TEV9 937 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 OTUD5Q96G74 571 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 ECT2Q9H8V3 914 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 NOP53Q9NZM5 478 aaKnown RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 OCLNQ16625 522 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SEL1L2Q5TEA6 688 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 CDR2LQ86X02 465 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-202ENST00000375427 NACAP1Q9BZK3 213 aa6.51□□□□□ -1.37
SCN2A-202ENST00000375427 SNPHO15079 494 aa6.5□□□□□ -1.37
SCN2A-202ENST00000375427 TADA3O75528 432 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms