RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 MBD4O95243 580 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP5P45974 858 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ACER1Q8TDN7 264 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 C12orf42Q96LP6 360 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ST18O60284 1047 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 APPP05067 770 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 PSMA5P28066 241 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 NEK4P51957 841 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CCNA1P78396 465 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 KRT32Q14532 448 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ALX1Q15699 326 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 TATDN1Q6P1N9 297 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 TM6SF1Q9BZW5 370 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SENP6Q9GZR1 1112 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ARMT1Q9H993 441 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SERPINB13Q9UIV8 391 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 RLFQ13129 1914 aa12.91□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MYH8P13535 1937 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SLC15A5A6NIM6 579 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 FGAP02671 866 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 PTPREP23469 700 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CNGA1P29973 690 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CYP2C19P33261 490 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CATSPERGQ6ZRH7 1159 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 HSCBQ8IWL3 235 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 KIAA1683Q9H0B3 1180 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 EHD4Q9H223 541 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
HLA-DQA1-202ENST00000374949 FOXP2O15409 715 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 SHMT1P34896 483 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 USP14P54578 494 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 EVX2Q03828 476 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GRB14Q14449 540 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CERKLQ49MI3 558 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 LCORLQ8N3X6 602 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TRPV1Q8NER1 839 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 RPAP3Q9H6T3 665 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 IVNS1ABPQ9Y6Y0 642 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MYH7P12883 1935 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GSG1L2A8MUP6 293 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ZNF213O14771 459 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CYP21A2P08686 494 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PLCD1P51178 756 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 LPAR1Q92633 364 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
HLA-DQA1-202ENST00000374949 DNM1LO00429 736 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PRKAB2O43741 272 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MSCO60682 206 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 HOXC6P09630 235 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CYBAP13498 195 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MCM2P49736 904 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 RTP1P59025 263 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 SEPT2Q15019 361 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ADCK5Q3MIX3 580 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CRNKL1Q9BZJ0 848 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms