RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PTPRCP08575 1304 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 FLT1P17948 1338 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 ROBO3Q96MS0 1386 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 GBF1Q92538 1859 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 SLC25A27O95847 323 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 ALADP13716 330 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 NHLH1Q02575 133 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 PLS1Q14651 629 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 GORABQ5T7V8 394 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 KLHDC9Q8NEP7 349 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 SLC4A7Q9Y6M7 1214 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 SIPA1L1O43166 1804 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 BRWD1Q9NSI6 2320 aa11.51□□□□□ -0.57
HLA-DOA-202ENST00000374813 ARVCFO00192 962 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 IGSF3O75054 1194 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 RPUSD2Q8IZ73 545 aaKnown RBP11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 SERPINB13Q9UIV8 391 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 FAM184BQ9ULE4 1060 aa11.5□□□□□ -0.57
HLA-DOA-202ENST00000374813 TRIOO75962 3097 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 A0A0U1RQG5 324 aaPredicted RBP11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 ZNF865P0CJ78 1059 aaPredicted RBP11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 FOXK2Q01167 660 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 TMEM67Q5HYA8 995 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 ACER1Q8TDN7 264 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 LRRC37A2A6NM11 1700 aa11.49□□□□□ -0.57
HLA-DOA-202ENST00000374813 DUSP11O75319 330 aaKnown RBP11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 ASGR1P07306 291 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 TAL1P17542 331 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 CST5P28325 142 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 DSG3P32926 999 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 CYP2C18P33260 490 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 RABGGTBP53611 331 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 KCTD2Q14681 263 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 MMP19Q99542 508 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 EHD4Q9H223 541 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
HLA-DOA-202ENST00000374813 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 CD4P01730 458 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 C6orf222P0C671 652 aaPredicted RBP11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 ATP2A2P16615 1042 aaKnown RBP11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 ZNF792Q3KQV3 632 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 PI16Q6UXB8 463 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 GJD3Q8N144 294 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 SEZ6LQ9BYH1 1024 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 PA2G4Q9UQ80 394 aaKnown RBP11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
HLA-DOA-202ENST00000374813 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 FLOT1O75955 427 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 PGK2P07205 417 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 MYOGP15173 224 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 COPB2P35606 906 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 TFCP2Q12800 502 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 GNASQ5JWF2 1037 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 FBXL18Q96ME1 805 aa11.46□□□□□ -0.57
HLA-DOA-202ENST00000374813 MYH1P12882 1939 aa11.46□□□□□ -0.58
HLA-DOA-202ENST00000374813 C5orf42Q9H799 3197 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 KIF28PB7ZC32 967 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 RFXAPO00287 272 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 PFKMP08237 780 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 MCAMP43121 646 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 LENG1Q96BZ8 264 aaPredicted RBP11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 LMCD1Q9NZU5 365 aa11.45□□□□□ -0.58
HLA-DOA-202ENST00000374813 ST18O60284 1047 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 CABYRO75952 493 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 CA3P07451 260 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 USP5P45974 858 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 GJA9P57773 515 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 SEPT2Q15019 361 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 MAMDC4Q6UXC1 1216 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms